Evidence map›Paper›PMID 9596635›Full record

ArticleThe Plant cell1998

Xa21D encodes a receptor-like molecule with a leucine-rich repeat domain that determines race-specific recognition and is subject to adaptive evolution.

G L Wang, D L Ruan, W Y Song, S Sideris, L Chen, L Y Pi, S Zhang, Z Zhang, C Fauquet, B S Gaut and 2 more

Abstract read
In one paragraph

Article in The Plant cell, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 114 papers.

0numbers the graph read from it
0cells of the map it votes in
114citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

114 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Plant immunity: Rice XA21-mediated resistance to bacterial infection.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  7. Genetic and physiological characterization of sunflower resistance provided by the wild-derived OrTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
  8. International journal of molecular sciences · 2022
    Article
  9. Research Progress on Cloning and Function ofFrontiers in plant science · 2022
    Review
  10. Article
  11. Genetic Mapping of a Resistance Locus toThe plant pathology journal · 2020
    Article
  12. Article
  13. ComprehensiveRSC advances · 2020
    Article
  14. Article
  15. Article
  16. Genetic Mapping and Molecular Characterization of a Broad-spectrumInternational journal of molecular sciences · 2019
    Article
  17. Article
  18. Article
  19. Article
  20. Article

54 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

G L WangDepartment of Plant Pathology, University of California at Davis, 1 Shields Avenue, Davis, California 95616, USA.
D L Ruan
W Y Song
S Sideris
L Chen
L Y Pi
S Zhang
Z Zhang
C Fauquet
B S Gaut
M C Whalen
P C Ronald

Funding

PHS HHS 47907
6 · The paper itself

Abstract

The rice Xa21 gene confers resistance to Xanthomonas oryzae pv oryzae in a race-specific manner. Analysis of the inheritance patterns and resistance spectra of transgenic plants carrying six Xa21 gene family members indicated that one member, designated Xa21D, displayed a resistance spectrum identical to that observed for Xa21 but conferred only partial resistance. Xa21D encodes a receptor-like protein carrying leucine-rich repeat (LRR) motifs in the presumed extracellular domain. The Xa21D transcript terminates shortly after the stop codon introduced by the retrotransposon Retrofit. Comparison of nucleotide substitutions in the LRR coding regions of Xa21 and Xa21D provided evidence of adaptive selection. Both functional and evolutionary evidence indicates that the Xa21D LRR domain controls race-specific pathogen recognition.

Indexed as

Biological EvolutionMultigene FamilyAdaptation, PhysiologicalAmino Acid SequenceDimerizationDisease SusceptibilityEvolution, MolecularLeucineMolecular Sequence DataOryzaPlant DiseasesPlant ProteinsPlants, Genetically ModifiedPolymerase Chain ReactionProtein Serine-Threonine KinasesReceptors, Cell SurfaceLeucinePlant ProteinsProtein Serine-Threonine KinasesReceptors, Cell SurfaceRetroelementsXa21 protein, Oryza sativa

Identifiers

PMID9596635
PMCPMC144027

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.