Evidence map›Paper›PMID 9585503›Full record

ArticleGenes & development1998

clr-1 encodes a receptor tyrosine phosphatase that negatively regulates an FGF receptor signaling pathway in Caenorhabditis elegans.

M Kokel, C Z Borland, L DeLong, H R Horvitz, M J Stern

Abstract read
In one paragraph

Article in Genes & development, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed.

  1. The conserved fibroblast growth factor receptor-based signaling is required for dendrite regeneration.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Article
  3. All Good Things Must End: Termination of Receptor Tyrosine Kinase Signal.International journal of molecular sciences · 2021
    Review
  4. Article
  5. Article
  6. EMBO molecular medicine · 2017
    Article
  7. TheDevelopment (Cambridge, England) · 2017
    Article
  8. The secreted MSP domain ofDevelopment (Cambridge, England) · 2017
    Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Canonical RTK-Ras-ERK signaling and related alternative pathways.WormBook : the online review of C. elegans biology · 2013
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

M KokelYale University School of Medicine, Department of Genetics, New Haven, Connecticut 06520-8005, USA.
C Z Borland
L DeLong
H R Horvitz
M J Stern

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Receptor tyrosine phosphatases have been implicated in playing important roles in cell signaling events by their ability to regulate the level of protein tyrosine phosphorylation. Although the catalytic activity of their phosphatase domains has been well established, the biological roles of these molecules are, for the most part, not well understood. Here we show that the Caenorhabditis elegans protein CLR-1 (CLeaR) is a receptor tyrosine phosphatase (RTP) with a complex extracellular region and two intracellular phosphatase domains. Mutations in clr-1 result in a dramatic Clr phenotype that we have used to study the physiological requirements for the CLR-1 RTP. We show that the phosphatase activity of the membrane-proximal domain is essential for the in vivo function of CLR-1. By contrast, we present evidence that the membrane-distal domain is not required to prevent the Clr phenotype in vivo. The Clr phenotype of clr-1 mutants is mimicked by activation of the EGL-15 fibroblast growth factor receptor (FGFR) and is suppressed by mutations that reduce or eliminate the activity of egl-15. Our data strongly indicate that CLR-1 attenuates the action of an FGFR-mediated signaling pathway by dephosphorylation.

Indexed as

Caenorhabditis elegans ProteinsGenes, HelminthProtein Processing, Post-TranslationalAllelesAmino Acid SequenceAnimalsCaenorhabditis elegansChromosomes, Artificial, YeastConsensus SequenceCOS CellsDNA, ComplementaryDNA, HelminthEscherichia coliGenes, SuppressorGenetic HeterogeneityHelminth ProteinsCaenorhabditis elegans ProteinsCLR-1 protein, C elegansDNA, ComplementaryDNA, HelminthEGL-15 protein, C elegansHelminth ProteinsProtein Tyrosine PhosphatasesReceptor-Like Protein Tyrosine PhosphatasesReceptors, Fibroblast Growth FactorRecombinant Fusion Proteins

Identifiers

PMID9585503
PMCPMC316843

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.