Evidence map›Paper›PMID 9582287›Full record

ArticleThe EMBO journal1998

Progression through the spliceosome cycle requires Prp38p function for U4/U6 snRNA dissociation.

J Xie, K Beickman, E Otte, B C Rymond

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 62 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

J XieT.H. Morgan School of Biological Sciences, University of Kentucky, Lexington, KY 40506-0225, USA.
K Beickman
E Otte
B C Rymond
University of Kentucky · US

Funding

FUNCTION OF SNRNP PARTICLES IN PREMRNA SPLICINGR01GM042476 · NIGMS · UNIVERSITY OF KENTUCKY · PI RYMOND, BRIAN C. · 1995 to 2007
$1.7M
FUNCTION OF SNRNP PARTICLES IN PRE-MRNA SPLICINGR29GM042476 · NIGMS · UNIVERSITY OF KENTUCKY · PI RYMOND, BRIAN C. · 1989 to 1993
–
NIGMS NIH HHS GM42476
6 · The paper itself

Abstract

The elaborate and energy-intensive spliceosome assembly pathway belies the seemingly simple chemistry of pre-mRNA splicing. Prp38p was previously identified as a protein required in vivo and in vitro for the first pre-mRNA cleavage reaction catalyzed by the spliceosome. Here we show that Prp38p is a unique component of the U4/U6.U5 tri-small nuclear ribonucleoprotein (snRNP) particle and is necessary for an essential step late in spliceosome maturation. Without Prp38p activity spliceosomes form, but arrest in a catalytically impaired state. Functional spliceosomes shed U4 snRNA before 5' splice-site cleavage. In contrast, Prp38p-defective spliceosomes retain U4 snRNA bound to its U6 snRNA base-pairing partner. Prp38p is the first tri-snRNP-specific protein shown to be dispensable for assembly, but required for conformational changes which lead to catalytic activation of the spliceosome.

Indexed as

RNA, Small NuclearRNA SplicingSaccharomyces cerevisiae ProteinsSpliceosomesFungal ProteinsRibonucleoprotein, U4-U6 Small NuclearRibonucleoprotein, U5 Small NuclearRNA Splicing FactorsFungal ProteinsPRP38 protein, S cerevisiaeRibonucleoprotein, U4-U6 Small NuclearRibonucleoprotein, U5 Small NuclearRNA, Small NuclearRNA Splicing FactorsSaccharomyces cerevisiae Proteins

Identifiers

PMID9582287
PMCPMC1170634
OpenAlexW1997403103

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.