Evidence map›Paper›PMID 9582199›Full record

ArticleGenome research1998

Sequencing multimegabase-template DNA with BigDye terminator chemistry.

C R Heiner, K L Hunkapiller, S M Chen, J I Glass, E Y Chen

Abstract read
In one paragraph

Article in Genome research, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed.

  1. Trial
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  8. Bioremediation of palm oil mill effluent (POME) using indigenous Meyerozyma guilliermondii.Environmental science and pollution research international · 2019
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  18. Molecular and functional analysis of nicotinate catabolism in Eubacterium barkeri.Proceedings of the National Academy of Sciences of the United States of America · 2006
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

C R HeinerAdvanced Center for Genetic Technology, PE-Applied Biosystems, Foster City, California 94404, USA.
K L Hunkapiller
S M Chen
J I Glass
E Y Chen

Funding

CONDITIONAL GENE TARGETING OF POMC IN THE HYPOTHALAMUSF31HG000201 · NHGRI · OREGON HEALTH AND SCIENCE UNIVERSITY · PI SMART, JAMES L · 1998 to 2001
$46k
U UREALYTICUM ANTIGENR01AI028279 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI CASSELL, GAIL H. · 1989 to 1998
–
NHGRI NIH HHS F31 HG000201NHGRI NIH HHS HG00201NIAID NIH HHS R01 AI28279
6 · The paper itself

Abstract

Using the recently introduced BigDye terminators, large-template DNA can be directly sequenced with custom primers on automated instruments. Cycle sequencing conditions are presented to sequence DNA samples isolated from a number of microbial genomes including 750-kb Ureaplasma urealyticum, 1.2-Mb Mycoplasma fermentans, 2.3-Mb Streptococcus pneumoniae, and 4.6-Mb Escherichia coli. Average read lengths of >700 bp from unique primer annealing sites are often sufficient to fill final gaps in microbial genome sequencing projects without additional manipulations of template DNA. The technique can also be applied to sequence-targeted regions, thereby bypassing tedious subcloning steps.

Indexed as

Base SequenceDNA, BacterialDNA PrimersEscherichia coliFluorescent DyesGenome, BacterialMolecular Sequence DataMycoplasma fermentansReproducibility of ResultsSequence Analysis, DNAStreptococcus pneumoniaeTemplates, GeneticDNA, BacterialDNA PrimersFluorescent Dyes

Identifiers

PMID9582199
PMCPMC310720

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.