Evidence map›Paper›PMID 9576795›Full record

ArticlePlant physiology1998

Substrate specificity of barley cysteine endoproteases EP-A and EP-B.

A Davy, I Svendsen, S O Sørensen, M Blom Sørensen, J Rouster, M Meldal, D J Simpson, V Cameron-Mills

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 52 citations in OpenAlex.

  1. Mycotoxins from Fusarium proliferatum: new inhibitors of papain-like cysteine proteases.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2020
    Article
  2. Review
  3. Oral enzyme therapy for celiac sprue.Methods in enzymology · 2012
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

A DavyCarlsberg Research Laboratory, Department of Chemistry and Department of Physiology, Carlsberg Laboratory, Gammel Carlsbergvej 10, DK-2500 Valby, Denmark.
I Svendsen
S O Sørensen
M Blom Sørensen
J Rouster
M Meldal
D J Simpson
V Cameron-Mills
Carlsberg Laboratory · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The cysteine endoproteases (EP)-A and EP-B were purified from green barley (Hordeum vulgare L.) malt, and their identity was confirmed by N-terminal amino acid sequencing. EP-B cleavage sites in recombinant type-C hordein were determined by N-terminal amino acid sequencing of the cleavage products, and were used to design internally quenched, fluorogenic peptide substrates. Tetrapeptide substrates of the general formula 2-aminobenzoyl-P2-P1-P1'-P2'-tyrosine(NO2)-aspartic acid, in which cleavage occurs between P1 and P1', showed that the cysteine EPs preferred phenylalanine, leucine, or valine at P2. Arginine was preferred to glutamine at P1, whereas proline at P2, P1, or P1' greatly reduced substrate kinetic specificity. Enzyme cleavage of C hordein was mainly determined by the primary sequence at the cleavage site, because elongation of substrates, based on the C hordein sequence, did not make them more suitable substrates. Site-directed mutagenesis of C hordein, in which serine or proline replaced leucine, destroyed primary cleavage sites. EP-A and EP-B were both more active than papain, mostly because of their much lower Km values.

Indexed as

Amino Acid SequenceBinding SitesChromogenic CompoundsCysteine EndopeptidasesEnzyme ActivationGlutensHordeumHydrolysisMolecular Sequence DataMolecular WeightMutagenesis, Site-DirectedPlant ProteinsSubstrate SpecificityChromogenic CompoundsCysteine EndopeptidasesGlutensPlant Proteins

Identifiers

PMID9576795
PMCPMC35010
OpenAlexW2007186979

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.