Evidence map›Paper›PMID 9566961›Full record

ArticleThe Journal of cell biology1998

Identification of two regions in apolipoprotein B100 that are exposed on the cytosolic side of the endoplasmic reticulum membrane.

X Du, J D Stoops, J R Mertz, C M Stanley, J L Dixon

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 26 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

X DuDepartment of Food Science and Human Nutrition, University of Missouri, Columbia, Missouri 65211, USA.
J D Stoops
J R Mertz
C M Stanley
J L Dixon
University of Missouri · USCUNY School of Law · US

Funding

REGULATION OF THE SECRETION OF APOB-LIPOPROTEINSR01HL047586 · NHLBI · UNIVERSITY OF MISSOURI-COLUMBIA · PI DIXON, JOSEPH L · 1997 to 2004
$1.0M
REGULATION OF THE SECRETION OF APOB-LIPOPROTEINSR29HL047586 · NHLBI · UNIVERSITY OF MISSOURI-COLUMBIA · PI DIXON, JOSEPH L · 1992 to 1995
–
NHLBI NIH HHS HL-47586NHLBI NIH HHS R01 HL047586
6 · The paper itself

Abstract

Protease protection assays of apolipoprotein B100 (apoB) in digitonin-permeabilized HepG2 cells indicated that multiple domains of apoB are exposed to the cytosol through an extensive portion of the secretory pathway. The intracellular orientation of apoB in the secretory pathway was confirmed by immunocytochemistry using antibodies recognizing specific domains of apoB in streptolysin-O (STP-O)- and saponin-permeabilized HepG2 cells. Lumenal epitopes on marker proteins in secretory pathway compartments (p63, p53, and galactosyltransferase) were not stained by antibodies in STP-O-treated cells, but were brightly stained in saponin-treated cells, confirming that internal membranes were not perforated in STP-O-treated cells. An anti-apoB peptide antibody (B4) recognizing amino acids 3221-3240 caused intense staining in close proximity to the nuclear membrane, and less intensely throughout the secretory pathway in STP-O-permeabilized cells. Staining with this antibody was similar in STP-O- and saponin-treated cells, indicating that this epitope in apoB is exposed to the cytosol at the site of apoB synthesis and throughout most of the remaining secretory pathway. Similar results indicating a cytosolic orientation were obtained with monoclonal antibody CC3.4, which recognizes amino acids 690-797 (79-91 kD) in apoB. Two polyclonal antibodies made to human LDL and two monoclonal antibodies recognizing amino acids 1878-2148 (D7.2) and 3214-3506 (B1B6) in apoB did not produce a strong reticular signal for apoB in STP-O-treated cells. The anti-LDL and B1B6 antibodies produced almost identical punctate patterns in STP-O-treated cells that overlapped with LAMP-1, a membrane marker for lysosomes. These observations suggest that the B1B6 epitope of apoB is exposed on the surface of the lysosome. The results identify two specific regions in apoB that are exposed to the cytosol in the secretory pathway.

Indexed as

Amino Acid SequenceAnimalsAntibodiesAntibodies, MonoclonalAntigens, CDApolipoprotein B-100Apolipoproteins BBinding SitesCell Membrane PermeabilityCytosolDigitoninEndopeptidase KEndoplasmic ReticulumFluorescent Antibody Technique, IndirectHumansImmunoblottingAntibodiesAntibodies, MonoclonalAntigens, CDApolipoprotein B-100Apolipoproteins BDigitoninEndopeptidase KLysosomal Membrane ProteinsMembrane GlycoproteinsPeptidesTritium

Identifiers

PMID9566961
PMCPMC2132751
OpenAlexW2008412361

What OpenQuestion holds

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LicenceCC BY-NC-SA
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.