Evidence map›Paper›PMID 9565644›Full record

ArticleThe Journal of experimental medicine1998

One of the CD3epsilon subunits within a T cell receptor complex lies in close proximity to the Cbeta FG loop.

Y Ghendler, A Smolyar, H C Chang, E L Reinherz

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 69 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Structural understanding of T cell receptor triggering.Cellular & molecular immunology · 2020
    Review
  6. Article
  7. Review
  8. Review
  9. An immunology primer for computational modelers.Journal of pharmacokinetics and pharmacodynamics · 2014
    Review
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Mechanisms for T cell receptor triggering.Nature reviews. Immunology · 2011
    Review
  16. Article
  17. The alphabeta T cell receptor is an anisotropic mechanosensor.The Journal of biological chemistry · 2009
    Article
  18. Article
  19. Article
  20. Crystal structure of a human CD3-epsilon/delta dimer in complex with a UCHT1 single-chain antibody fragment.Proceedings of the National Academy of Sciences of the United States of America · 2004
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Y GhendlerLaboratory of Immunobiology, Dana-Farber Cancer Institute and Department of Medicine, Harvard Medical School, Boston, Massachusetts 02115, USA.
A Smolyar
H C Chang
E L Reinherz
Dana-Farber Cancer Institute · USHarvard University · US

Funding

T CELL ANTIGEN RECOGNITIONR37AI019807 · NIAID · DANA-FARBER CANCER INSTITUTE · PI REINHERZ, ELLIS L · 1999 to 2008
$4.4M
T Cell Antigen RecognitionR01AI019807 · NIAID · DANA-FARBER CANCER INSTITUTE · PI REINHERZ, ELLIS L · 1985 to 2010
$1.3M
T Cell Antigen RecognitionR56AI019807 · NIAID · DANA-FARBER CANCER INST · PI REINHERZ, ELLIS L · 2012 to 2012
$430k
BASIS OF TCR RECOGNITION OF PEPTIDE/MHC COMPLEXESR01AI039098 · NIAID · DANA-FARBER CANCER INSTITUTE · PI CHANG, HSIU-CHING · 1996 to 1999
–
NIAID NIH HHS AI-19807NIAID NIH HHS AI-39098NIAID NIH HHS R01 AI019807NIAID NIH HHS R37 AI019807NIAID NIH HHS R56 AI019807
6 · The paper itself

Abstract

A recent crystal structure of the N15 alpha/beta-T cell receptor (TCR) in complex with an Fab derived from the H57 Cbeta-specific monoclonal antibody (mAb) shows the mAb fragment interacting with the elongated FG loop of the Cbeta domain. This loop creates one side wall of a cavity within the TCR Ti-alpha/beta constant region module (CalphaCbeta) while the CD and EF loops of the Calpha domain form another wall. The cavity size is sufficient to accommodate a single nonglycosylated Ig domain such as the CD3epsilon ectodomain. By using specific mAbs to mouse TCR-beta (H57) and CD3epsilon (2C11) subunits, we herein provide evidence that only one of the two CD3epsilon chains within the TCR complex is located in close proximity to the TCR Cbeta FG loop, in support of the above notion. Moreover, analysis of T cells isolated from transgenic mice expressing both human and mouse CD3epsilon genes shows that the heterologous human CD3epsilon component can replace the mouse CD3epsilon at this site. The location of one CD3epsilon subunit within the rigid constant domain module has implications for the mechanism of signal transduction throughout T cell development.

Indexed as

AnimalsAntibodies, MonoclonalBinding SitesCD3 ComplexFlow CytometryHumansMiceMice, TransgenicModels, MolecularReceptors, Antigen, T-CellSignal TransductionSpleenT-LymphocytesAntibodies, MonoclonalCD3 ComplexReceptors, Antigen, T-Cell

Identifiers

PMID9565644
PMCPMC2212265
OpenAlexW2036611271

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.