Evidence map›Paper›PMID 9560364›Full record

ReviewGenetics1998

The lacI gene as a target for mutation in transgenic rodents and Escherichia coli.

J G de Boer, B W Glickman

Open access · bronzeAbstract readReview
In one paragraph

Review in Genetics, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Mutational Biases Influence Parallel Adaptation.Molecular biology and evolution · 2017
    Article
  3. Article
  4. Assisted reproductive technologies do not alter mutation frequency or spectrum.Proceedings of the National Academy of Sciences of the United States of America · 2007
    Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

J G de BoerCentre for Environmental Health, University of Victoria, British Columbia, Canada. jdboer@uvic.ca
B W Glickman
University of Victoria · CA

Funding

MOLECULAR ANALYSIS OF 1ACI MUTATIONS IN TRANSGENIC MOUSEN01ES035365 · NIEHS · UNIVERSITY OF VICTORIA · PI GLICKMAN, BARRY W · 1993 to 1997
–
NIEHS NIH HHS N01-ES-35365
6 · The paper itself

Abstract

The lacI gene has been used extensively for the recovery and analysis of mutations in bacteria with various DNA repair backgrounds and after exposure to a wide variety of mutagens. This has resulted in a large database of information on mutational mechanisms and specificity of many mutagens, as well as the effect of DNA repair background on mutagenicity. Most importantly, knowledge about the mutational sensitivity of the lacI gene is now available, yielding information about mutable nucleotides. This popularity and available knowledge resulted in the use of the lacI gene in transgenic rodents for the study of mutagenesis in mammals, where it resides in approximately 40 repeated copies. As the number of sequenced mutations recovered from these animals increases, we are able to analyze the sites at which mutations have been recovered in great detail and to compare the recovered sites between bacteria and transgenic animals. The nucleotides that code for the DNA-binding domain are nearly saturated with base substitutions. Even after determining the sequences of approximately 10,000 mutations recovered from the animals, however, new sites and new changes are still being recovered. In addition, we compare the nature of deletion mutations between bacteria and animals. Based on the nature of deletions in the animals, we conclude that each deletion occurs in a single copy of the gene.

Indexed as

Escherichia coli ProteinsMutationAmino Acid SequenceAnimalsAnimals, Genetically ModifiedBacterial ProteinsBase SequenceColorDNADNA MethylationEscherichia coliHumansLac RepressorsMolecular Sequence DataRepressor ProteinsRodentiaBacterial ProteinsDNAEscherichia coli ProteinsLacI protein, E coliLac RepressorsRepressor Proteins

Identifiers

PMID9560364
PMCPMC1460077
OpenAlexW2169238431

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.