Evidence map›Paper›PMID 9546368›Full record

ArticleThe American journal of pathology1998

Methylation alterations of the MyoD1 upstream region are predictive of subclassification of human rhabdomyosarcomas.

B Chen, P Dias, J J Jenkins, V H Savell, D M Parham

Abstract read
In one paragraph

Article in The American journal of pathology, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
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  5. Article
  6. Pediatric Rhabdomyosarcoma.Critical reviews in oncogenesis · 2015
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

B ChenDepartment of Pathology, University of Arkansas for Medical Sciences, and Arkansas Children's Hospital, Little Rock 72202, USA.
P Dias
J J Jenkins
V H Savell
D M Parham
Arkansas Children's Hospital · US

Funding

NCI NIH HHS P30 CA217657
6 · The paper itself

Abstract

MyoD1 expression is a distinguishing characteristic of rhabdomyosarcoma. In this study, distinct methylation alterations were identified in the 5' flanking region of the MyoD1 gene from the two major subtypes, ie, alveolar and embryonal rhabdomyosarcoma. The MyoD1 methylation patterns of 26 rhabdomyosarcomas were compared with that of normal skeletal muscle and nonmuscle specimens by Southern blot analysis using methylation-sensitive restriction enzymes HhaI and HpaII. A 5-kb region immediately upstream of the MyoD1 coding sequence was found to be methylated in adult muscle and all nonmuscle tissues tested. The MyoD1 upstream region was unmethylated in the majority of the alveolar rhabdomyosarcomas (13 of 15, 87%) examined in this study. In contrast, 10 of 11 (91%) embryonal rhabdomyosarcomas showed a methylation pattern that was also observed in fetal muscle cells, in which the CpG sites in the MyoD1 upstream region were partially methylated. Our data suggest that the methylation status of the MyoD1 upstream CpG sites may be related to rhabdomyosarcoma tumorigenesis and may have valuable implications for its differential diagnosis.

Indexed as

DNA MethylationAdolescentAdultBlotting, SouthernCloning, MolecularDiagnosis, DifferentialHumansImmunohistochemistryLiverLungMuscle, SkeletalMyoD ProteinPancreasPolymerase Chain ReactionRhabdomyosarcomaRhabdomyosarcoma, AlveolarMyoD1 myogenic differentiation proteinMyoD ProteinTrans-Activators

Identifiers

PMID9546368
PMCPMC1858244
OpenAlexW1420660787

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.