Evidence map›Paper›PMID 9545242›Full record

ArticleThe EMBO journal1998

Xvent-1 mediates BMP-4-induced suppression of the dorsal-lip-specific early response gene XFD-1' in Xenopus embryos.

H Friedle, S Rastegar, H Paul, E Kaufmann, W Knöchel

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 50 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. The identification of hematopoietic-specific regulatory elements forMolecular therapy. Methods & clinical development · 2016
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Neural induction and factors that stabilize a neural fate.Birth defects research. Part C, Embryo today : reviews · 2009
    Review
  12. Article
  13. Article
  14. Review
  15. Antagonistic role of vega1 and bozozok/dharma homeobox genes in organizer formation.Proceedings of the National Academy of Sciences of the United States of America · 2000
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

H FriedleAbteilung Biochemie, Universität Ulm, Albert-Einstein-Allee 11, D-89081 Ulm, Germany.
S Rastegar
H Paul
E Kaufmann
W Knöchel
Universität Ulm · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ectopic expression of the ventralizing morphogen BMP-4 (bone morphogenetic protein-4) in the dorsal lip (Spemann organizer) of Xenopus embryos blocks transcription of dorsal-lip-specific early response genes. We investigated the molecular mechanism underlying the BMP-4-induced inhibition of the fork head gene XFD-1'. The promoter of this gene contains a BMP-triggered inhibitory element (BIE) which prevents activation of this gene at the ventral/vegetal side of the embryo in vivo. In the present study, we show that BMP-4-induced inhibition is not direct but indirect, and is mediated by Xvent homeobox proteins. Micro-injections of Xvent-1 RNA and XFD-1' promoter deletion mutants demonstrate that Xvent-1 mimics the effect of BMP-4 signalling not only by suppression of the XFD-1' gene, but also by utilizing the BIE. Suppression could be reverted using a dominant-negative Xvent-1 mutant. The repressor domain was localized to the N-terminal region of the protein. Gel-shift and footprint analyses prove that Xvent-1 binds to the BIE. Moreover, PCR-based target-site selection for the Xvent-1 homeodomain confirms distinct motifs within the BIE as preferential binding sites. Thus, biological and molecular data suggest that Xvent-1 acts as direct repressor for XFD-1' transcription and mediates BMP-4-induced inhibition.

Indexed as

Gene Expression Regulation, DevelopmentalTrans-ActivatorsTranscription, GeneticXenopus ProteinsAnimalsBase SequenceBinding SitesBone Morphogenetic Protein 4Bone Morphogenetic ProteinsDNADNA-Binding ProteinsForkhead Transcription FactorsHomeodomain ProteinsMolecular Sequence DataMutagenesisRepressor Proteinsbmp4 protein, XenopusBone Morphogenetic Protein 4Bone Morphogenetic ProteinsDNADNA-Binding ProteinsForkhead Transcription FactorsFoxA4 protein, Xenopusfoxd4l1.1 protein, XenopusHomeodomain ProteinsRepressor ProteinsSmad ProteinsTrans-ActivatorsXenopus Proteins

Identifiers

PMID9545242
PMCPMC1170573
OpenAlexW2149285902

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.