Evidence map›Paper›PMID 9539443›Full record

ArticleGenetics1998

Suppressors of an Arabidopsis thaliana phyB mutation identify genes that control light signaling and hypocotyl elongation.

J W Reed, R P Elumalai, J Chory

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
10.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 112 citations in OpenAlex.

  1. Review
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  3. bioRxiv : the preprint server for biology · 2023
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  11. PCH1 regulates light, temperature, and circadian signaling as a structural component of phytochrome B-photobodies inProceedings of the National Academy of Sciences of the United States of America · 2019
    Article
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  13. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

J W ReedBiology Department, University of North Carolina, Chapel Hill 27599-3280, USA. jreed@email.unc.edu
R P Elumalai
J Chory
University of North Carolina at Chapel Hill · USHoward Hughes Medical Institute · US

Funding

INITIAL EVENTS IN PHOTORECEPTOR SIGNALINGR01GM052413 · NIGMS · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI CHORY, JOANNE · 1995 to 2016
$5.4M
GENETIC DISSECTION OF PHYTOCHROME B SIGNALLINGR29GM052456 · NIGMS · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI REED, JASON W · 1995 to 1999
–
NIGMS NIH HHS R01-GM52413NIGMS NIH HHS R29-GM52456
6 · The paper itself

Abstract

Ambient light controls the development and physiology of plants. The Arabidopsis thaliana photoreceptor phytochrome B (PHYB) regulates developmental light responses at both seedling and adult stages. To identify genes that mediate control of development by light, we screened for suppressors of the long hypocotyl phenotype caused by a phyB mutation. Genetic analyses show that the shy (short hypocotyl) mutations we have isolated fall in several loci. Phenotypes of the mutants suggest that some of the genes identified have functions in control of light responses. Other loci specifically affect cell elongation or expansion.

Indexed as

Genes, PlantMutagenesisPhotoreceptor CellsTranscription FactorsArabidopsisArabidopsis ProteinsDarknessHypocotylLightPhenotypePhytochromePhytochrome BPlant ProteinsPlant RootsTime FactorsArabidopsis ProteinsPHYB protein, ArabidopsisPhytochromePhytochrome BPlant ProteinsTranscription Factors

Identifiers

PMID9539443
PMCPMC1460030
OpenAlexW1787264146

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.