Evidence map›Paper›PMID 9529104›Full record

ArticleInfection and immunity1998

Molecular characterization of the fragilysin pathogenicity islet of enterotoxigenic Bacteroides fragilis.

J S Moncrief, A J Duncan, R L Wright, L A Barroso, T D Wilkins

Open access · bronzeAbstract read
In one paragraph

Article in Infection and immunity, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 67 citations in OpenAlex.

  1. Article
  2. Review
  3. Colorectal cancer-associatedJournal of bacteriology · 2025
    Article
  4. Complete genome sequence of an enterotoxigenicMicrobiology resource announcements · 2025
    Article
  5. Bacteroides fragilis in saliva: investigating links with ulcerative colitis.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2024
    Article
  6. IntestinalmBio · 2024
    Article
  7. Article
  8. Review
  9. Which bacterial toxins are worthy of validation as markers in colorectal cancer screening? A critical review.Biomedical papers of the Medical Faculty of the University Palacky, Olomouc, Czechoslovakia · 2022
    Review
  10. Review
  11. Gastrointestinal Pathobionts in Pediatric Crohn's Disease Patients.International journal of microbiology · 2018
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. A novel mechanism of latency in matrix metalloproteinases.The Journal of biological chemistry · 2015
    Article
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

J S MoncriefDepartment of Biochemistry, Fralin Center for Biotechnology, Virginia Polytechnic Institute and State University, Blacksburg 24061-0346, USA. jmoncrie@vt.edu
A J Duncan
R L Wright
L A Barroso
T D Wilkins
Virginia Tech · US

Funding

NIAID NIH HHS AI322940
6 · The paper itself

Abstract

Enterotoxigenic strains of Bacteroides fragilis produce an extracellular metalloprotease toxin (termed fragilysin) which is cytopathic to intestinal epithelial cells and induces fluid secretion and tissue damage in ligated intestinal loops. We report here that the fragilysin gene is contained within a small genetic element termed the fragilysin pathogenicity islet. The pathogenicity islet of B. fragilis VPI 13784 was defined as 6,033 bp in length and contained nearly perfect 12-bp direct repeats near its ends. Sequencing across the ends of the pathogenicity islet from two additional enterotoxigenic strains, along with PCR analysis of 20 additional enterotoxigenic strains, revealed that the islet is inserted at a specific site on the B. fragilis chromosome. The site of integration in three nontoxigenic strains contained a 17-bp GC-rich sequence which was not present in toxigenic strains and may represent a target sequence for chromosomal integration. In addition to the fragilysin gene, we identified an open reading frame encoding a predicted protein with a size and structural features similar to those of fragilysin. The deduced amino acid sequence was 28.5% identical and 56.3% similar to fragilysin and contained a nearly identical zinc-binding motif and methionine-turn region.

Indexed as

Amino Acid SequenceBacteroides fragilisBase SequenceEnterotoxinsMetalloendopeptidasesMolecular Sequence DataOpen Reading FramesPolymerase Chain ReactionEnterotoxinsfragilysinMetalloendopeptidases

Identifiers

PMID9529104
PMCPMC108111
OpenAlexW2160636110

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.