Evidence map›Paper›PMID 9528762›Full record

ArticleMolecular and cellular biology1998

A differential screen for ligand-regulated genes: identification of HoxA10 as a target of vitamin D3 induction in myeloid leukemic cells.

N Y Rots, M Liu, E C Anderson, L P Freedman

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
3.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 83 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

N Y RotsCell Biology Program, Memorial Sloan-Kettering Cancer Center, New York, New York 10021, USA.
M Liu
E C Anderson
L P Freedman
Memorial Sloan Kettering Cancer Center · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
VITAMIN D3-INDUCIBLE GENES MEDIATING DIFFERENTIATIONR01DK052621 · NIDDK · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI NIMER, STEPHEN DAVID · 1997 to 2004
$1.4M
MECHANISMS OF GENE CONTROL BY THE VITAMIN D3 RECEPTORR01DK045460 · NIDDK · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI FISHER, ROBERT P · 1992 to 2004
$874k
MECHANISMS OF GENE CONTROL BY THE VITAMIN D3 RECEPTORR37DK045460 · NIDDK · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI FREEDMAN, LEONARD P · 2000 to 2001
$583k
NCI NIH HHS CA-08748NCI NIH HHS P30 CA008748NIDDK NIH HHS DK-45460NIDDK NIH HHS DK-52621NIDDK NIH HHS R01 DK045460NIDDK NIH HHS R01 DK052621NIDDK NIH HHS R37 DK045460
6 · The paper itself

Abstract

1,25-Dihydroxyvitamin D3 [1,25(OH)2D3], the hormonal ligand for vitamin D3, is a potent inducer of myeloid-leukemic-cell differentiation. Such cells differentiate exclusively into monocytes/macrophages in response to this ligand. Since 1,25(OH)2D3 transduces its hormone signal through the vitamin D3 receptor (VDR), a ligand-modulated transcription factor and member of the nuclear hormone receptor superfamily, we sought to identify direct VDR target genes induced during this differentiation process. To do so, we applied a modified differential screen with a nascent-RNA purification strategy using biases for immediate-early-response genes induced by 1,25(OH)2D3 in the myelomonocytic cell line U937. Using this screen, we had previously identified p21Waf1/Cip1 as a gene transcriptionally induced by 1,25(OH)2D3 and demonstrated that this induction facilitates the differentiation of U937 cells into monocytes/macrophages (24). Here, we describe in detail our differential screen strategy and the identification and isolation of 20 1,25(OH)2D3-inducible genes or unknown cDNAs by means of this screen. One gene newly identified as a target of VDR regulation in myeloid cells is the homeobox HoxA10 gene. HoxA10 protein may act as a general regulator of cell growth, since overexpression of HoxA10 facilitated the differentiation of U937 cells into monocytes/macrophages independent of 1,25(OH)2D3 and acted to strongly inhibit the growth of the breast cancer cell line MCF-7 by arresting these cells in G1.

Indexed as

Genes, HomeoboxHomeodomain ProteinsBreast NeoplasmsCalcitriolDNA-Binding ProteinsFemaleG1 PhaseGene Expression Regulation, NeoplasticGenetic TechniquesHomeobox A10 ProteinsHumansLeukemia, MyeloidLigandsReceptors, CalcitriolSignal TransductionTumor Cells, CulturedCalcitriolDNA-Binding ProteinsHomeobox A10 ProteinsHomeodomain ProteinsHoxa10 protein, mouseLigandsReceptors, Calcitriol

Identifiers

PMID9528762
PMCPMC121420
OpenAlexW2132045524

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.