Evidence map›Paper›PMID 9525638›Full record

ArticleJournal of virology1998

CBF, Myb, and Ets binding sites are important for activity of the core I element of the murine retrovirus SL3-3 in T lymphocytes.

A L Zaiman, A Nieves, J Lenz

Abstract read
In one paragraph

Article in Journal of virology, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

A L ZaimanDepartment of Molecular Genetics, Albert Einstein College of Medicine, Bronx, New York 10461, USA.
A Nieves
J Lenz

Funding

WORD PROCESSORP30CA013330 · NCI · YESHIVA UNIVERSITY · PI THOMAS E ROHAN · 1985 to 2026
$111.2M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM007288 · NIGMS · YESHIVA UNIVERSITY · PI AKABAS, MYLES H. · 1985 to 2022
$35.6M
LEUKEMOGENESIS BY MURINE RETROVIRUSESR01CA044822 · NCI · YESHIVA UNIVERSITY · PI LENZ, JACK R. · 1987 to 2006
$2.4M
FUNCTIONS OF LEUKEMIA VIRUS R REGIONSR01CA057337 · NCI · YESHIVA UNIVERSITY · PI LENZ, JACK R. · 1992 to 1996
–
NCI NIH HHS CA44822NCI NIH HHS CA57337NCI NIH HHS P30 CA013330NCI NIH HHS R01 CA044822NIGMS NIH HHS GM7288NIGMS NIH HHS T32 GM007288
6 · The paper itself

Abstract

Transcriptional enhancers within the long terminal repeats of murine leukemia viruses are major determinants of the pathogenic properties of these viruses. Mutations were introduced into the adjacent binding sites for three transcription factors within the enhancer of the T-cell-lymphomagenic virus SL3-3. The sites that were tested were, in 5'-to-3' order, a binding site for core binding factor (CBF) called core II, a binding site for c-Myb, a site that binds members of the Ets family of factors, and a second CBF binding site called core I. Mutation of each site individually reduced transcriptional activity in T lymphocytes. However, mutation of the Myb and core I binding sites had larger effects than mutation of the Ets or core II site. The relative effects on transcription in T cells paralleled the effects of the same mutations on viral lymphomagenicity, consistent with the idea that the role of these sequences in viral lymphomagenicity is indeed to regulate transcription in T cells. Mutations were also introduced simultaneously into multiple sites in the SL3-3 enhancer. The inhibitory effects of these mutations indicated that the transcription factor in T cells that recognizes the core I element of SL3-3, presumably CBF, needed to synergize with one or more factors bound at the upstream sites to function. This was tested further by generating a multimer construct that contained five tandem core I elements linked to a basal long terminal repeat promoter. This construct was inactive in T cells. However, transcriptional activity was detected with a multimer construct in which the transcription factor binding sites upstream of the core were also present. These results are consistent with the hypothesis that CBF requires heterologous transcription factors bound at nearby sites to function in T cells.

Indexed as

Enhancer Elements, GeneticGenes, ViralNeoplasm ProteinsTranscription, GeneticAnimalsBinding SitesCore Binding FactorsDNA-Binding ProteinsHumansJurkat CellsLeukemia Virus, MurineMiceMutagenesisProto-Oncogene ProteinsProto-Oncogene Proteins c-etsProto-Oncogene Proteins c-mybCore Binding FactorsDNA-Binding ProteinsNeoplasm ProteinsProto-Oncogene ProteinsProto-Oncogene Proteins c-etsProto-Oncogene Proteins c-mybTrans-ActivatorsTranscription Factors

Identifiers

PMID9525638
PMCPMC109765

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.