Evidence map›Paper›PMID 9521110›Full record

ArticleProtein science : a publication of the Protein Society1998

Solid-state NMR studies of the membrane-bound closed state of the colicin E1 channel domain in lipid bilayers.

Y Kim, K Valentine, S J Opella, S L Schendel, W A Cramer

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
8.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 78 citations in OpenAlex.

  1. Bacterial pore-forming toxins.Microbiology (Reading, England) · 2022
    Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Continuity conditions and torsion angles from ssNMR orientational restraints.Journal of magnetic resonance (San Diego, Calif. : 1997) · 2008
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. A solid-state NMR index of helical membrane protein structure and topology.Journal of magnetic resonance (San Diego, Calif. : 1997) · 2000
    Article
  16. Correlation of the structural and functional domains in the membrane protein Vpu from HIV-1.Proceedings of the National Academy of Sciences of the United States of America · 1999
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Y KimDepartment of Chemistry, University of Pennsylvania, Philadelphia 19104, USA.
K Valentine
S J Opella
S L Schendel
W A Cramer
Purdue University West Lafayette · USUniversity of Pennsylvania · US

Funding

THE MECHANISM OF ACTION OF COLICIN E1R01GM018457 · NIGMS · PURDUE UNIVERSITY WEST LAFAYETTE · PI CRAMER, WILLIAM A. · 1985 to 2007
$2.2M
SOLID-STATE NMR OF PEPTIDESR01GM029754 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI OPELLA, STANLEY J · 1985 to 2002
$670k
NMR STRUCTURAL STUDIES OF MEMBRANE PROTEINSR01AI020770 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI OPELLA, STANLEY J · 1985 to 1997
–
NIAID NIH HHS R01AI20770NIGMS NIH HHS GM-18457NIGMS NIH HHS R01GM29754
6 · The paper itself

Abstract

The colicin E1 channel polypeptide was shown to be organized anisotropically in membranes by solid-state NMR analysis of samples of uniformly 15N-labeled protein in oriented planar phospholipid bilayers. The 190 residue C-terminal colicin E1 channel domain is the largest polypeptide to have been characterized by 15N solid-state NMR spectroscopy in oriented membrane bilayers. The 15N-NMR spectra of the colicin E1 show that: (1) the structure and dynamics are independent of anionic lipid content in both oriented and unoriented samples; (2) assuming the secondary structure of the polypeptide is helical, there are both trans-membrane and in-plane helical segments; (3) trans-membrane helices account for approximately 20-25% of the channel polypeptide, which is equivalent to 38-48 residues of the 190-residue polypeptide. The results of the two-dimensional PISEMA spectrum are interpreted in terms of a single trans-membrane helical hairpin inserted into the bilayer from each channel molecule. These data are also consistent with this helical hairpin being derived from the 38-residue hydrophobic segment near the C-terminus of the colicin E1 channel polypeptide.

Indexed as

Amino Acid SequenceColicinsLipid BilayersMagnetic Resonance SpectroscopyMembrane ProteinsMolecular Sequence DataPhospholipidsColicinsLipid BilayersMembrane ProteinsPhospholipids

Identifiers

PMID9521110
PMCPMC2143909
OpenAlexW2000149654

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.