Evidence map›Paper›PMID 9504914›Full record

ArticleGenetics1998

Functional dissection of yeast Hir1p, a WD repeat-containing transcriptional corepressor.

H DeSilva, K Lee, M A Osley

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 38 citations in OpenAlex.

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  15. Chromatin assembly factor 1 is essential and couples chromatin assembly to DNA replication in vivo.Proceedings of the National Academy of Sciences of the United States of America · 2003
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

H DeSilvaProgram in Molecular Biology, Sloan Kettering Cancer Center and Cornell University Graduate School of Medical Sciences, New York, New York 10021, USA.
K Lee
M A Osley
Cornell University · US

Funding

Genetic Analysis of H2B Ubiquitylation in YeastR01GM040118 · NIGMS · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI OSLEY, MARY ANN · 1988 to 2015
$4.7M
NIGMS NIH HHS GM40118NIGMS NIH HHS R01 GM040118
6 · The paper itself

Abstract

The HIR1 gene product is required to repress transcription of three of the four histone gene loci in Saccharomyces cerivisiae, and like its counterpart, the HIR2 protein, it functions as a transcriptional corepressor. Although Hir1p and Hir2p are physically associated in yeast, Hir1p is able to function independently of Hir2p when it is artificially recruited to the histone HTA1 promoter. A deletion analysis of HIR1 has revealed two separate repression domains: one in its N terminus, where seven copies of the beta-transducin or WD40 motif reside, and the second in the remaining C-terminal amino acids. Overexpression of the WD repeats in a hir1delta strain complemented its Hir- phenotype, while overexpression of the C terminus in a wild-type strain caused both Hir- and Spt- phenotypes. The Hir1p C terminus physically interacted in vivo with Hir2p, and both Hir1p repression domains interacted with full-length Hir1p. It was additionally found that the Hir1p WD repeats functionally interacted with the SPT4, SPT5, and SPT6 gene products, suggesting that these repeats may direct Hir1p to different protein complexes.

Indexed as

Saccharomyces cerevisiae ProteinsDNA Mutational AnalysisFungal ProteinsGene Expression Regulation, FungalHistonesMutationNuclear ProteinsPhenotypePromoter Regions, GeneticRepressor ProteinsRNA, MessengerSaccharomyces cerevisiaeTranscription, GeneticFungal ProteinsHIR1 protein, S cerevisiaeHIR2 protein, S cerevisiaeHistonesNuclear ProteinsRepressor ProteinsRNA, MessengerSaccharomyces cerevisiae Proteins

Identifiers

PMID9504914
PMCPMC1459821
OpenAlexW2160419924

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.