Evidence map›Paper›PMID 9477570›Full record

ArticleThe Plant cell1998

SPA1: a new genetic locus involved in phytochrome A-specific signal transduction.

U Hoecker, Y Xu, P H Quail

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 86 papers.

0numbers the graph read from it
0cells of the map it votes in
86citing papers in PubMed
21.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

86 citing papers in PubMed, 160 citations in OpenAlex.

  1. Article
  2. Article
  3. International journal of molecular sciences · 2026
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  5. Review
  6. Article
  7. Article
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  9. Plant direct · 2022
    Article
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  11. Review
  12. Article
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  14. Article
  15. Article
  16. Article
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  19. Review
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26 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

U HoeckerDepartment of Plant and Microbial Biology, University of California, Berkeley 94720, USA.
Y Xu
P H Quail
University of California, Berkeley · USPlant Gene Expression Center · US

Funding

NIGMS NIH HHS GM4745
6 · The paper itself

Abstract

To identify mutants potentially defective in signaling intermediates specific to phytochrome A (phyA), we screened for extragenic mutations that suppress the morphological phenotype exhibited by a weak phyA mutant (phyA-105) of Arabidopsis. A new recessive mutant, designated spa1 (for suppressor of phyA-105), was isolated and mapped to the bottom of chromosome 2. spa1 phyA-105 double mutants exhibit restoration of several responses to limiting fluence rates of continuous far-red light that are absent in the parental phyA-105 mutant, such as deetiolation, anthocyanin accumulation, and a far-red light-induced inability of seedlings to green upon subsequent transfer to continuous white light. spa1 mutations do not cause a phenotype in darkness, indicating that the suppression phenotype is light dependent. Enhanced photoresponsiveness was observed in spa1 seedlings in a wild-type PHYA background as well as in the mutant phyA-105 background but not in a mutant phyA null background. These results indicate that phyA is necessary in a non-allele-specific fashion for the expression of the spa1 mutant phenotype and that phyB to phyE are not sufficient for this effect. Taken together, the data suggest that spa1 mutations specifically amplify phyA signaling and therefore that the SPA1 locus encodes a component that acts negatively early in the phyA-specific signaling pathway.

Indexed as

Genes, PlantGenes, SuppressorAnthocyaninsArabidopsisArabidopsis ProteinsChromosome MappingDarknessDose-Response Relationship, RadiationLightModels, BiologicalMutationPhytochromePhytochrome ASignal TransductionSuppression, GeneticAnthocyaninsArabidopsis ProteinsPHYA protein, ArabidopsisPhytochromePhytochrome A

Identifiers

PMID9477570
PMCPMC143933
OpenAlexW2167239493

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.