Evidence map›Paper›PMID 9461473›Full record

ArticleNucleic acids research1998

A novel E box/AT-rich element is required for muscle-specific expression of the sarcoplasmic reticulum Ca2+-ATPase (SERCA2) gene.

D L Baker, V Dave, T Reed, S Misra, M Periasamy

Open access · bronzeAbstract read
In one paragraph

Article in Nucleic acids research, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 34 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

D L BakerDivision of Cardiology, University of Cincinnati College of Medicine, ML542, 231 Bethesda Avenue, Cincinnati, OH 45267, USA.
V Dave
T Reed
S Misra
M Periasamy
University of Cincinnati Medical Center · US

Funding

VENTRICULAR MYOSIN LIGHT CHAIN 2 FUNCTION IN NORMAL AND FAILING HEARTSP50HL052318 · NHLBI · UNIVERSITY OF CINCINNATI · PI DORN, GERALD W. · 1995 to 2004
$8.8M
TRAINING IN CARDIOVASCULAR BIOLOGYT32HL007382 · NHLBI · UNIVERSITY OF CINCINNATI · PI SCHWARTZ, ARNOLD · 1985 to 2012
$5.9M
MOLECULAR ANALYSIS OF SR CALCIUM ATPASE GENE EXPRESSIONF32HL009409 · NHLBI · UNIVERSITY OF CINCINNATI · PI BAKER, DEBRA L · 1995 to 1997
–
NHLBI NIH HHS F32 HL09409NHLBI NIH HHS HL07382-20NHLBI NIH HHS HL52318
6 · The paper itself

Abstract

The cardiac/slow twitch sarcoplasmic reticulum (SR) Ca2+-ATPase gene (SERCA2 ) encodes a calcium transport pump whose expression is regulated in a tissue- and development-specific manner. Previously we have identified two distinct positive regulatory regions (bp -284 to -72 and -1815 to -1105) as important for SERCA2 promoter activity. Here we demonstrate that the SERCA2 distal promoter region functions like an enhancer by activating a heterologous promoter (TK) in a muscle cell-specific manner. Through deletion analysis a core enhancer region was delimited to the -1467 to -1105 bp fragment. We identified the E box/AT-rich element located at -1115 bp as critical for maximal enhancer activity. Gel mobility shift studies revealed that this E box/AT-rich element specifically binds a protein which is induced during Sol8 myogenesis. This region includes two other cis -acting elements, CArG and MCAT, which also bind specific nuclear protein complexes from Sol8 myotubes. Mutagenesis of each of these sites resulted in decreased SERCA/TK-CAT promoter activity. Based on these data, we propose that the E box/AT-rich element may contribute along with CArG and MCAT elements to the overall activation and regulation of the SERCA2 gene promoter.

Indexed as

Gene Expression Regulation3T3 CellsAnimalsBase SequenceBinding SitesCalcium-Transporting ATPasesCell LineChromosome MappingDNADNA FingerprintingEnhancer Elements, GeneticMiceMolecular Sequence DataMuscle, SkeletalMutagenesis, Site-DirectedMyocardiumCalcium-Transporting ATPasesDNANuclear Proteins

Identifiers

PMID9461473
PMCPMC147358
OpenAlexW2081548855

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.