Evidence map›Paper›PMID 9461442›Full record

ReviewNucleic acids research1998

Genome structure and gene content in protist mitochondrial DNAs.

M W Gray, B F Lang, R Cedergren, G B Golding, C Lemieux, D Sankoff, M Turmel, N Brossard, E Delage, T G Littlejohn and 5 more

Open access · hybridAbstract readComparative StudyReview
In one paragraph

Review in Nucleic acids research, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 118 papers.

0numbers the graph read from it
0cells of the map it votes in
118citing papers in PubMed
12.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

118 citing papers in PubMed, 364 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. The Complete Mitochondrial Genome Sequence ofLife (Basel, Switzerland) · 2024
    Article
  6. Review
  7. Mitochondrial genome diversity ofFrontiers in microbiology · 2023
    Article
  8. Article
  9. The complete mitochondrial genome ofFrontiers in microbiology · 2022
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Large Differences in the HaptophyteFrontiers in microbiology · 2021
    Article
  15. Review
  16. Review
  17. Article
  18. Article
  19. Article
  20. Review

58 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 1 institution in 1 country.

M W GrayProgram in Evolutionary Biology, Canadian Institute for Advanced Research, Department of Biochemistry, Dalhousie University, Halifax, Nova Scotia B3H 4H7, Canada. m.w.gray@dal.ca
B F Lang
R Cedergren
G B Golding
C Lemieux
D Sankoff
M Turmel
N Brossard
E Delage
T G Littlejohn
I Plante
P Rioux
D Saint-Louis
Y Zhu
G Burger
Dalhousie University · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although the collection of completely sequenced mitochondrial genomes is expanding rapidly, only recently has a phylogenetically broad representation of mtDNA sequences from protists (mostly unicellular eukaryotes) become available. This review surveys the 23 complete protist mtDNA sequences that have been determined to date, commenting on such aspects as mitochondrial genome structure, gene content, ribosomal RNA, introns, transfer RNAs and the genetic code and phylogenetic implications. We also illustrate the utility of a comparative genomics approach to gene identification by providing evidence that orfB in plant and protist mtDNAs is the homolog of atp8 , the gene in animal and fungal mtDNA that encodes subunit 8 of the F0portion of mitochondrial ATP synthase. Although several protist mtDNAs, like those of animals and most fungi, are seen to be highly derived, others appear to be have retained a number of features of the ancestral, proto-mitochondrial genome. Some of these ancestral features are also shared with plant mtDNA, although the latter have evidently expanded considerably in size, if not in gene content, in the course of evolution. Comparative analysis of protist mtDNAs is providing a new perspective on mtDNA evolution: how the original mitochondrial genome was organized, what genes it contained, and in what ways it must have changed in different eukaryotic phyla.

Indexed as

GenomeAmino Acid SequenceAnimalsBacteriaDatabases, FactualDNA, MitochondrialEukaryotaFungiGenetic CodeHumansIntronsMolecular Sequence DataOrganellesPhylogenyPlantsRNA, RibosomalDNA, MitochondrialRNA, RibosomalRNA, Transfer

Identifiers

PMID9461442
PMCPMC147373
OpenAlexW2105323211

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.