Evidence map›Paper›PMID 9457672›Full record

ArticleMammalian genome : official journal of the International Mammalian Genome Society1998

Construction and extensive characterization of a goat bacterial artificial chromosome library with threefold genome coverage.

L Schibler, D Vaiman, A Oustry, N Guinec, A L Dangy-Caye, A Billault, E P Cribiu

Abstract read
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In one paragraph

Article in Mammalian genome : official journal of the International Mammalian Genome Society, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
12.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 60 citations in OpenAlex.

  1. Review
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  8. An extended river buffalo (Bubalus bubalis, 2n = 50) cytogenetic map: assignment of 68 autosomal loci by FISH-mapping and R-banding and comparison with human chromosomes.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2008
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  11. Identification by R-banding and FISH of chromosome arms involved in Robertsonian translocations in several deer species.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2003
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  14. Mutation in bone morphogenetic protein receptor-IB is associated with increased ovulation rate in Booroola Mérino ewes.Proceedings of the National Academy of Sciences of the United States of America · 2001
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  17. A high-density physical map of Sinorhizobium meliloti 1021 chromosome derived from bacterial artificial chromosome library.Proceedings of the National Academy of Sciences of the United States of America · 1999
    Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

L SchiblerDépartement de Génétique Animale, INRA, Jouy-en-Josas, France.
D Vaiman
A Oustry
N Guinec
A L Dangy-Caye
A Billault
E P Cribiu
Département Génétique Animale · FRFondation Jean Dausset-CEPH · FRInstitut National de la Recherche Agronomique · MA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A goat Bacterial Artificial Chromosome (BAC) library of 61,440 independent clones was constructed and characterized. The average size of the inserts was estimated at 153 kilobases by analyzing almost 500 clones using Not1 digestion followed by FIGE (Field Inverted Gel Electrophoresis) analysis. The library represents about three genome equivalents, which yields a theoretical probability of 0.95 of isolating a particular DNA sequence. After individual growth, the clones were arrayed in 40 superpools, which were organized in three dimension pools. A rapid technique for pool DNA preparation by microwave treatment was set up. This technique was compatible with PCR analysis. Primer pairs from 166 sequences (microsatellites, coding sequences from goat, and conserved Expressed Sequence Tags (ESTs) from humans) enabled the library to be successfully searched in 165 cases, with an average of 3.52 positive superpools. Only one sequence could not be found. The degree of chimerism was evaluated by FISH analysis with DNA from over 110 clones and was estimated at 4%. This BAC library will constitute an invaluable tool for positional cloning in ruminants, as well as for more general comparative mapping studies in mammals.

Indexed as

Chromosomes, BacterialGene LibraryGenomeAnimalsChimeraChromosome MappingCloning, MolecularDNA Transposable ElementsElectrophoresis, Agar GelGoatsIn Situ Hybridization, FluorescenceMicrosatellite RepeatsMicrowavesSequence Analysis, DNADNA Transposable Elements

Identifiers

PMID9457672
OpenAlexW2060214224

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.