Evidence map›Paper›PMID 9434942›Full record

ArticleMammalian genome : official journal of the International Mammalian Genome Society1998

Genomic structure and chromosomal localization of the mouse Ogg1 gene that is involved in the repair of 8-hydroxyguanine in DNA damage.

M Tani, K Shinmura, T Kohno, T Shiroishi, S Wakana, S R Kim, T Nohmi, H Kasai, S Takenoshita, Y Nagamachi and 1 more

Abstract read
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In one paragraph

Article in Mammalian genome : official journal of the International Mammalian Genome Society, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 52 citations in OpenAlex.

  1. Mitochondrial DNA Damage and Its Repair Mechanisms in Aging Oocytes.International journal of molecular sciences · 2024
    Review
  2. Article
  3. Article
  4. Regulation of DNA repair by S-nitrosylation.Biochimica et biophysica acta · 2012
    Review
  5. Alcohol consumption and oxidative DNA damage.International journal of environmental research and public health · 2011
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Accumulation of premutagenic DNA lesions in mice defective in removal of oxidative base damage.Proceedings of the National Academy of Sciences of the United States of America · 1999
    Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 1 country.

M TaniBiology Division, National Cancer Center Research Institute, Tokyo, Japan.
K Shinmura
T Kohno
T Shiroishi
S Wakana
S R Kim
T Nohmi
H Kasai
S Takenoshita
Y Nagamachi
J Yokota
Gunma University · JPNational Institute of Health Sciences · JPCentral Institute for Experimental Animals · JPNational Institute of Genetics · JPUniversity of Occupational and Environmental Health Japan · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

8-Hydroxyguanine (7,8-dihydro-8-oxoguanine: oh8Gua) is a damaged form of guanine induced by oxygen-free radicals and causes GC to TA transversions. Previously we isolated the hOGG1 gene, a human homolog of the yeast OGG1 gene, which encodes a DNA glycosylase and lyase to excise oh8Gua in DNA. In this study, we isolated a mouse homolog (Ogg1) of the OGG1 gene, characterized oh8Gua-specific DNA glycosylase/AP lyase activities of its product, and determined chromosomal localization and exon-intron organization of this gene. A predicted protein possessed five domains homologous to human and yeast OGG1 proteins. Helix-hairpin-helix and C2H2 zinc finger-like DNA-binding motifs found in human and yeast OGG1 proteins were also retained in mouse Ogg1 protein. The properties of a GST fusion protein were identical to human and yeast OGG1 proteins in glycosylase/lyase activities, their substrate specificities, and suppressive activities against the spontaneous mutagenesis of an Escherichia coli mutM mutY double mutant. The mouse Ogg1 gene was mapped to Chromosome (Chr) 6, and consisted of 7 exons approximately 6 kb long. Two DNA-binding motifs were encoded in exons 4 through 5. These data will facilitate the investigation of the OGG1 gene to elucidate the relationship between oxidative DNA damage and carcinogenesis.

Indexed as

Chromosome MappingDNA DamageDNA RepairEscherichia coli ProteinsAmino Acid SequenceAnimalsBase SequenceDNA, ComplementaryDNA-Formamidopyrimidine GlycosylaseGlutathione TransferaseGuanineHumansMiceMolecular Sequence DataN-Glycosyl HydrolasesRecombinant Fusion Proteins8-hydroxyguanineDNA, ComplementaryDNA-Formamidopyrimidine GlycosylaseDNA-formamidopyrimidine glycosylase, E coliEscherichia coli ProteinsGlutathione TransferaseGuanineN-Glycosyl HydrolasesRecombinant Fusion Proteins

Identifiers

PMID9434942
OpenAlexW2160504172

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.