Evidence map›Paper›PMID 9422586›Full record

ArticleJournal of bacteriology1998

Metabolic roles of a Rhodobacter sphaeroides member of the sigma32 family.

R K Karls, J Brooks, P Rossmeissl, J Luedke, T J Donohue

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 36 citations in OpenAlex.

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  12. Bacterial responses to photo-oxidative stress.Nature reviews. Microbiology · 2009
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

R K KarlsDepartment of Bacteriology, University of Wisconsin-Madison, 53706, USA.
J Brooks
P Rossmeissl
J Luedke
T J Donohue
University of Wisconsin–Madison · US

Funding

BIOTECHNOLOGY TRAINING PROGRAMT32GM008349 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI FOX, BRIAN G · 1989 to 2019
$22.5M
REGULATION OF THE HEAT-SHOCK RESPONSE IN E COLIR01GM036278 · NIGMS · UNIVERSITY OF WISCONSIN MADISON · PI GROSS, CAROL ANNE · 1986 to 2016
$5.2M
REGULATION OF THE HEAT SHOCK RESPONSE IN E. COLIR37GM036278 · NIGMS · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI GROSS, CAROL ANNE · 1995 to 2004
$2.0M
PROCESS AND REGULATION OF CYTOCHROME C SYNTHESISR01GM037509 · NIGMS · UNIVERSITY OF WISCONSIN MADISON · PI DONOHUE, TIMOTHY J · 1988 to 2002
$852k
NIGMS NIH HHS GM08349NIGMS NIH HHS GM36278NIGMS NIH HHS GM37509NIGMS NIH HHS R01 GM036278NIGMS NIH HHS R01 GM037509NIGMS NIH HHS R37 GM036278NIGMS NIH HHS T32 GM008349
6 · The paper itself

Abstract

We report the role of a gene (rpoH) from the facultative phototroph Rhodobacter sphaeroides that encodes a protein (sigma37) similar to Escherichia coli sigma32 and other members of the heat shock family of eubacterial sigma factors. R. sphaeroides sigma37 controls genes that function during environmental stress, since an R. sphaeroides deltaRpoH mutant is approximately 30-fold more sensitive to the toxic oxyanion tellurite than wild-type cells. However, the deltaRpoH mutant lacks several phenotypes characteristic of E. coli cells lacking sigma32. For example, an R. sphaeroides deltaRpoH mutant is not generally defective in phage morphogenesis, since it plates the lytic virus RS1, as well as its wild-type parent. In characterizing the response of R. sphaeroides to heat, we found that its growth temperature profile is different when cells generate energy by aerobic respiration, anaerobic respiration, or photosynthesis. However, growth of the deltaRpoH mutant is comparable to that of a wild-type strain under each of these conditions. The deltaRpoH mutant mounted a heat shock response when aerobically grown cells were shifted from 30 to 42 degrees C, but it exhibited altered induction kinetics of approximately 120-, 85-, 75-, and 65-kDa proteins. There was also reduced accumulation of several presumed heat shock transcripts (rpoD P(HS), groESL1, etc.) when aerobically grown deltaRpoH cells were placed at 42 degrees C. Under aerobic conditions, it appears that another sigma factor enables the deltaRpoH mutant to mount a heat shock response, since either RNA polymerase preparations from an deltaRpoH mutant, reconstituted Esigma37, or a holoenzyme containing a 38-kDa protein (sigma38) each transcribed E. coli Esigma32-dependent promoters. The lower growth temperature profile of photosynthetic cells is correlated with a difference in heat-inducible gene expression, since neither wild-type cells or the deltaRpoH mutant mount a typical heat shock response after such cultures were shifted from 30 to 37 degrees C.

Indexed as

Transcription FactorsAerobiosisAmino Acid SequenceAnaerobiosisBacterial ProteinsBacteriophage lambdaCoenzymesDNA-Directed RNA PolymerasesHeat-Shock ProteinsHeat-Shock ResponseMolecular Sequence DataMutationPhotosynthesisRestriction MappingRhodobacter sphaeroidesRNA, BacterialBacterial ProteinsCoenzymesDNA-Directed RNA PolymerasesHeat-Shock Proteinsheat-shock sigma factor 32RNA, BacterialRNA, MessengerRNA polymerase Esigma(38)SigB protein, BacteriaSigma FactorTranscription Factors

Identifiers

PMID9422586
PMCPMC106842
OpenAlexW2131337742

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.