Evidence map›Paper›PMID 9407036›Full record

ArticleGenes & development1997

Tcn1p/Crz1p, a calcineurin-dependent transcription factor that differentially regulates gene expression in Saccharomyces cerevisiae.

D P Matheos, T J Kingsbury, U S Ahsan, K W Cunningham

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 137 papers.

0numbers the graph read from it
0cells of the map it votes in
137citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

137 citing papers in PubMed, 329 citations in OpenAlex.

  1. Article
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  5. Review
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  7. Calcineurin controls the cytokinesis machinery during thermal stress inProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  8. Article
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  12. Light Stress in Yeasts: Signaling and Responses in Creatures of the Night.International journal of molecular sciences · 2023
    Review
  13. TheInternational journal of molecular sciences · 2023
    Article
  14. Review
  15. Article
  16. Azole-Resistant Alleles ofAntimicrobial agents and chemotherapy · 2022
    Article
  17. Review
  18. Review
  19. Article
  20. Article

77 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

D P MatheosDepartment of Biology, Johns Hopkins University, Baltimore, Maryland 21218 USA.
T J Kingsbury
U S Ahsan
K W Cunningham
Johns Hopkins University · US

Funding

CALCIUM SIGNALING AND TRANSPORT IN S CEREVISIAER01GM053082 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI CUNNINGHAM, KYLE W · 1996 to 2008
$2.8M
NIGMS NIH HHS GM53082NIGMS NIH HHS R01 GM053082
6 · The paper itself

Abstract

Ca2+ signals regulate gene expression in animal and yeast cells through mechanisms involving calcineurin, a protein phosphatase activated by binding Ca2+ and calmodulin. Tcn1p, also named Crz1p, was identified as a transcription factor in yeast required for the calcineurin-dependent induction of PMC1, PMR1, PMR2A, and FKS2 which confer tolerance to high Ca2+, Mn2+, Na+, and cell wall damage, respectively. Tcn1p was not required for other calcineurin-dependent processes, such as inhibition of a vacuolar H+/Ca2+ exchanger and inhibition of a pheromone-stimulated Ca2+ uptake system, suggesting that Tcn1p functions downstream of calcineurin on a branch of the calcium signaling pathway leading to gene expression. Tcn1p contains three zinc finger motifs at its carboxyl terminus resembling the DNA-binding domains of Zif268, Swi5p, and other transcription factors. When fused to the transcription activation domain of Gal4p, the carboxy terminal domain of Tcn1p directed strong calcineurin-independent expression of PMC1-lacZ and other target genes. The amino-terminal domain of Tcn1p was found to function as a calcineurin-dependent transcription activation domain when fused to the DNA-binding domain of Gal4p. This amino-terminal domain also formed Ca2+-dependent and FK506-sensitive interactions with calcineurin in the yeast two-hybrid assay. These findings suggest that Tcn1p functions as a calcineurin-dependent transcription factor. Interestingly, induction of Tcn1p-dependent genes was found to be differentially controlled in response to physiological Ca2+ signals generated by treatment with mating pheromone and high salt. We propose that different promoters are sensitive to variations in the strength of Ca2+ signals generated by these stimuli and to effects of other signaling pathways.

Indexed as

Gene Expression Regulation, FungalGlucosyltransferasesSaccharomyces cerevisiae ProteinsAmino Acid Sequencebeta-GalactosidaseBinding SitesCalcineurinCalciumCalcium-Transporting ATPasesDNA-Binding ProteinsFungal ProteinsGenes, ReporterMembrane ProteinsMolecular Sequence DataPheromonesPlasma Membrane Calcium-Transporting ATPasesbeta-GalactosidaseCalcineurinCalciumCalcium-Transporting ATPasesCRZ1 protein, S cerevisiaeDNA-Binding ProteinsFungal ProteinsGlucosyltransferasesGSC2 protein, S cerevisiaeMembrane ProteinsPheromonesPlasma Membrane Calcium-Transporting ATPasesPMC1 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsTrans-ActivatorsTranscription Factors

Identifiers

PMID9407036
PMCPMC316804
OpenAlexW2080565111

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.