ArticleProceedings of the National Academy of Sciences of the United States of America1997
Comparative mapping of Andropogoneae: Saccharum L. (sugarcane) and its relation to sorghum and maize.
Article in Proceedings of the National Academy of Sciences of the United States of America, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.
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Who cites it
29 citing papers in PubMed.
- QTL mapping and identification of candidate genes linked to red rot resistance in sugarcane.3 Biotech · 2023Article
- A draft chromosome-scale genome assembly of a commercial sugarcane.Scientific reports · 2022Article
- Identification of potential MTAs and candidate genes for juice quality- and yield-related traits in Saccharum clones: a genome-wide association and comparative genomic study.Molecular genetics and genomics : MGG · 2022Article
- Comparative analysis of sucrose phosphate synthase (SPS) gene family between Saccharum officinarum and Saccharum spontaneum.BMC plant biology · 2020Article
- Species-specific abundant retrotransposons elucidate the genomic composition of modern sugarcane cultivars.Chromosoma · 2020Article
- Recent polyploidization events in three Saccharum founding species.Plant biotechnology journal · 2019Article
- Photosynthetic Regulation Under Salt Stress and Salt-Tolerance Mechanism of Sweet Sorghum.Frontiers in plant science · 2019Review
- A mosaic monoploid reference sequence for the highly complex genome of sugarcane.Nature communications · 2018Article
- The Challenge of Analyzing the Sugarcane Genome.Frontiers in plant science · 2018Review
- Red rot resistant gene characterization using RGAP markers among sugarcane cultivars resistant and susceptible to the red rot disease.3 Biotech · 2017Article
- Mining sequence variations in representative polyploid sugarcane germplasm accessions.BMC genomics · 2017Article
- GBS-based single dosage markers for linkage and QTL mapping allow gene mining for yield-related traits in sugarcane.BMC genomics · 2017Article
- Identification of putative candidate genes for red rot resistance in sugarcane (Saccharum species hybrid) using LD-based association mapping.Molecular genetics and genomics : MGG · 2016Article
- Assessment of Functional EST-SSR Markers (Sugarcane) in Cross-Species Transferability, Genetic Diversity among Poaceae Plants, and Bulk Segregation Analysis.Genetics research international · 2016Article
- Comprehensive selection of reference genes for gene expression normalization in sugarcane by real time quantitative rt-PCR.PloS one · 2014Article
- Article
- Sugarcane (Saccharum X officinarum): A Reference Study for the Regulation of Genetically Modified Cultivars in Brazil.Tropical plant biology · 2011Article
- C4GEM, a genome-scale metabolic model to study C4 plant metabolism.Plant physiology · 2010Article
- Genetic mapping of QTLs for sugar-related traits in a RIL population of Sorghum bicolor L. Moench.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2010Article
- Article
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3 authors.
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No grant is acknowledged in the PubMed record.
Abstract
Comparative genetic maps of Papuan Saccharum officinarum L. (2n = 80) and S. robustum (2n = 80) were constructed by using single-dose DNA markers (SDMs). SDM-framework maps of S. officinarum and S. robustum were compared with genetic maps of sorghum and maize by way of anchor restriction fragment length polymorphism probes. The resulting comparisons showed striking colinearity between the sorghum and Saccharum genomes. There were no differences in marker order between S. officinarum and sorghum. Furthermore, there were no alterations in SDM order between S. officinarum and S. robustum. The S. officinarum and S. robustum maps also were compared with the map of the polysomic octoploid S. spontaneum 'SES 208' (2n = 64, x = 8), thus permitting relations to homology groups ("chromosomes") of S. spontaneum to be studied. Investigation of transmission genetics in S. officinarum and S. robustum confirmed preliminary results that showed incomplete polysomy in these species. Because of incomplete polysomy, multiple-dose markers could not be mapped for lack of a genetic model for their segregation. To coalesce S. officinarum and S. robustum linkage groups into homology groups (composed of homologous pairing partners), they were compared with sorghum (2n = 20), which functioned as a synthetic diploid. Groupings suggested by comparative mapping were found to be highly concordant with groupings based on highly polymorphic restriction fragment length polymorphism probes detecting multiple SDMs. The resulting comparative maps serve as bridges to allow information from one Andropogoneae to be used by another, for breeding, ecology, evolution, and molecular biology.
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