ArticleNucleic acids research1998
The Signal Recognition Particle Database (SRPDB).
Article in Nucleic acids research, 1998. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
21 citing papers in PubMed, 34 citations in OpenAlex.
- Nearest Neighbor Parameters for Estimating RNA Folding Stability withbioRxiv : the preprint server for biology · 2026Article
- Thermodynamic characterization of naturally occurring RNA pentaloops.RNA (New York, N.Y.) · 2022Article
- Accelerated RNA secondary structure design using preselected sequences for helices and loops.RNA (New York, N.Y.) · 2018Article
- bpRNA: large-scale automated annotation and analysis of RNA secondary structure.Nucleic acids research · 2018Article
- Exact calculation of loop formation probability identifies folding motifs in RNA secondary structures.RNA (New York, N.Y.) · 2016Article
- Analysis of secondary structural elements in human microRNA hairpin precursors.BMC bioinformatics · 2016Article
- Accelerating calculations of RNA secondary structure partition functions using GPUs.Algorithms for molecular biology : AMB · 2013Article
- Thermodynamic characterization of RNA 2 × 3 nucleotide internal loops.Biochemistry · 2012Article
- Multilign: an algorithm to predict secondary structures conserved in multiple RNA sequences.Bioinformatics (Oxford, England) · 2011Article
- Thermodynamic characterization of RNA triloops.Biochemistry · 2010Article
- ProbKnot: fast prediction of RNA secondary structure including pseudoknots.RNA (New York, N.Y.) · 2010Article
- Thermodynamic characterization of naturally occurring RNA tetraloops.RNA (New York, N.Y.) · 2010Article
- Improved RNA secondary structure prediction by maximizing expected pair accuracy.RNA (New York, N.Y.) · 2009Article
- Thermodynamic characterization of tandem mismatches found in naturally occurring RNA.Nucleic acids research · 2009Article
- Detection of non-coding RNAs on the basis of predicted secondary structure formation free energy change.BMC bioinformatics · 2006Article
- A set of nearest neighbor parameters for predicting the enthalpy change of RNA secondary structure formation.Nucleic acids research · 2006Article
- Conformation of 4.5S RNA in the signal recognition particle and on the 30S ribosomal subunit.RNA (New York, N.Y.) · 2005Article
- Using an RNA secondary structure partition function to determine confidence in base pairs predicted by free energy minimization.RNA (New York, N.Y.) · 2004Article
- Secondary structure models of the 3' untranslated regions of diverse R2 RNAs.RNA (New York, N.Y.) · 2004Article
- Isolation of a novel member of small G protein superfamily and its expression in colon cancer.World journal of gastroenterology · 2003Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
3 authors at 1 institution in 1 country.
Funding
Abstract
This release of the SRPDB (signal recognition particle database, http://pegasus.uthct.edu/SRPDB/SRPDB . html ) adds four SRP RNA sequences (a total of 99 SRP RNA sequences), 23 SRP protein sequences (a total of 63 protein sequences from SRP9, SRP14, SRP19, SRP21, SRP54, SRP68 or SRP72), and, for the first time, sequences of the alpha subunit of the eukaryotic SRP receptor and its homologous bacterial proteins (a total of 21 sequences). Sequences are offered phylogenetically ordered, annotated with links to the primary databases, and in aligned form. Also downloadable are sample SRP RNA secondary structure diagrams, three-dimensional models of representative SRP RNAs, and search motifs.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.