Evidence map›Paper›PMID 9398665›Full record

ArticleMolecular biology of the cell1997

SET1, a yeast member of the trithorax family, functions in transcriptional silencing and diverse cellular processes.

C Nislow, E Ray, L Pillus

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 141 papers.

0numbers the graph read from it
0cells of the map it votes in
141citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

141 citing papers in PubMed, 241 citations in OpenAlex.

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  9. Histone H3 tail modifications required for meiosis inbioRxiv : the preprint server for biology · 2024
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  10. Review
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  13. Review
  14. MLL3/MLL4 enzymatic activity shapes DNA replication timing.bioRxiv : the preprint server for biology · 2023
    Article
  15. Epigenetics · 2023
    Review
  16. Review
  17. Review
  18. Article
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  20. Article

81 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

C NislowDepartment of Molecular, Cellular, and Developmental Biology, University of Colorado, Boulder, Colorado 80309-0347, USA.
E Ray
L Pillus
University of Colorado Boulder · US

Funding

WORKSHOPS AND TRAINING FOR IMAGE ANALYSIS USING IMODP41RR000592 · NCRR · UNIVERSITY OF COLORADO AT BOULDER · PI BASS, PETER W. · 1985 to 2011
$11.9M
NCRR NIH HHS P41 RR000592
6 · The paper itself

Abstract

The trithorax gene family contains members implicated in the control of transcription, development, chromosome structure, and human leukemia. A feature shared by some family members, and by other proteins that function in chromatin-mediated transcriptional regulation, is the presence of a 130- to 140-amino acid motif dubbed the SET or Tromo domain. Here we present analysis of SET1, a yeast member of the trithorax gene family that was identified by sequence inspection to encode a 1080-amino acid protein with a C-terminal SET domain. In addition to its SET domain, which is 40-50% identical to those previously characterized, SET1 also shares dispersed but significant similarity to Drosophila and human trithorax homologues. To understand SET1 function(s), we created a null mutant. Mutant strains, although viable, are defective in transcriptional silencing of the silent mating-type loci and telomeres. The telomeric silencing defect is rescued not only by full-length episomal SET1 but also by the conserved SET domain of SET1. set1 mutant strains display other phenotypes including morphological abnormalities, stationary phase defects, and growth and sporulation defects. Candidate genes that may interact with SET1 include those with functions in transcription, growth, and cell cycle control. These data suggest that yeast SET1, like its SET domain counterparts in other organisms, functions in diverse biological processes including transcription and chromatin structure.

Indexed as

Drosophila ProteinsGene SilencingTransferasesAmino Acid SequenceAnimalsCell DivisionCell SizeChromosomes, FungalCloning, MolecularDNA-Binding ProteinsFungal ProteinsGenes, FungalGenes, Mating Type, FungalHistone-Lysine N-MethyltransferaseHumansMolecular Sequence DataDNA-Binding ProteinsDrosophila ProteinsFungal ProteinsHistone-Lysine N-MethyltransferaseRAM2 protein, S cerevisiaeRNA, MessengerSaccharomyces cerevisiae ProteinsSET1 protein, S cerevisiaeTranscription FactorsTransferasesTrl protein, Drosophila

Identifiers

PMID9398665
PMCPMC25717
OpenAlexW1963545795

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.