Evidence map›Paper›PMID 9396748›Full record

ArticleThe Journal of cell biology1997

Peroxisomal targeting, import, and assembly of alcohol oxidase in Pichia pastoris.

H R Waterham, K A Russell, Y Vries, J M Cregg

Abstract read
In one paragraph

Article in The Journal of cell biology, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

H R WaterhamDepartment of Biochemistry and Molecular Biology, Oregon Graduate Institute of Science and Technology, Portland, Oregon 97291-1000, USA.
K A Russell
Y Vries
J M Cregg

Funding

PEROXISOME BIOGENESIS IN YEASTR01DK043698 · NIDDK · OREGON HEALTH AND SCIENCE UNIVERSITY · PI CREGG, JAMES MICHAEL · 1992 to 2000
$231k
NIDDK NIH HHS DK-43698
6 · The paper itself

Abstract

Alcohol oxidase (AOX), the first enzyme in the yeast methanol utilization pathway is a homooctameric peroxisomal matrix protein. In peroxisome biogenesis-defective (pex) mutants of the yeast Pichia pastoris, AOX fails to assemble into active octamers and instead forms inactive cytoplasmic aggregates. The apparent inability of AOX to assemble in the cytoplasm contrasts with other peroxisomal proteins that are able to oligomerize before import. To further investigate the import of AOX, we first identified its peroxisomal targeting signal (PTS). We found that sequences essential for targeting AOX are primarily located within the four COOH-terminal amino acids of the protein leucine-alanine-arginine-phenylalanine COOH (LARF). To examine whether AOX can oligomerize before import, we coexpressed AOX without its PTS along with wild-type AOX and determined whether the mutant AOX could be coimported into peroxisomes. To identify the mutant form of AOX, the COOH-terminal LARF sequence of the protein was replaced with a hemagglutinin epitope tag (AOX-HA). Coexpression of AOX-HA with wild-type AOX (AOX-WT) did not result in an increase in the proportion of AOX-HA present in octameric active AOX, suggesting that newly synthesized AOX-HA cannot oligomerize with AOX-WT in the cytoplasm. Thus, AOX cannot initiate oligomerization in the cytoplasm, but must first be targeted to the organelle before assembly begins.

Indexed as

Alcohol OxidoreductasesAmino Acid Sequencebeta-LactamasesCell FractionationCentrifugation, Density GradientEpitopesEscherichia coliFluorescent Antibody Technique, IndirectHemagglutininsMacromolecular SubstancesMicrobodiesMolecular Sequence DataMutagenesis, Site-DirectedOrganellesPichiaRecombinant Fusion Proteinsalcohol oxidaseAlcohol Oxidoreductasesbeta-LactamasesEpitopesHemagglutininsMacromolecular SubstancesRecombinant Fusion Proteins

Identifiers

PMID9396748
PMCPMC2132610

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.