Evidence map›Paper›PMID 9380682›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1997

Both DNA gyrase and reverse gyrase are present in the hyperthermophilic bacterium Thermotoga maritima.

O Guipaud, E Marguet, K M Noll, C B de la Tour, P Forterre

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Review
  2. How Do Thermophiles Organize Their Genomes?Microbes and environments · 2024
    Review
  3. Genomic attributes of thermophilic and hyperthermophilic bacteria and archaea.World journal of microbiology & biotechnology · 2022
    Review
  4. Article
  5. The regulation of DNA supercoiling across evolution.Protein science : a publication of the Protein Society · 2021
    Review
  6. Article
  7. Article
  8. Reverse gyrase is essential for microbial growth at 95 °C.Extremophiles : life under extreme conditions · 2017
    Article
  9. Article
  10. Review
  11. Review
  12. DNA self-assembly: from chirality to evolution.International journal of molecular sciences · 2013
    Review
  13. Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

O GuipaudLaboratoire de Biologie Moléculaire du Gène chez les Extrémophiles, Institut de Génétique et Microbiologie, Université Paris-Sud, 91405 Orsay Cedex, France. guipaud@igmors.u-psud.fr
E Marguet
K M Noll
C B de la Tour
P Forterre

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Like all hyperthermophiles yet tested, the bacterium Thermotoga maritima contains a reverse gyrase. Here we show that it contains also a DNA gyrase. The genes top2A and top2B encoding the two subunits of a DNA gyrase-like enzyme have been cloned and sequenced. The Top2A (type II DNA topoisomerase A protein) is more similar to GyrA (DNA gyrase A protein) than to ParC [topoisomerase IV (Topo IV) C protein]. The difference is especially striking at the C-terminal domain, which differentiates DNA gyrases from Topo IV. DNA gyrase activity was detected in T. maritima and purified to homogeneity using a novobiocin-Sepharose column. This hyperhermophilic DNA gyrase has an optimal activity around 82-86 degrees C. In contrast to plasmids from hyperthermophilic archaea, which are from relaxed to positively supercoiled, we found that the plasmid pRQ7 from Thermotoga sp. RQ7 is negatively supercoiled. pRQ7 became positively supercoiled after addition of novobiocin to cell cultures, indicating that its negative supercoiling is due to the DNA gyrase of the host strain. The findings concerning DNA gyrase and negative supercoiling in Thermotogales put into question the role of reverse gyrase in hyperthermophiles.

Indexed as

Cloning, MolecularDNA, BacterialDNA, SuperhelicalDNA Topoisomerases, Type IIGram-Negative Anaerobic BacteriaMolecular Sequence DataNovobiocinPlasmidsDNA, BacterialDNA, SuperhelicalDNA Topoisomerases, Type IINovobiocin

Identifiers

PMID9380682
PMCPMC23419

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.