Evidence map›Paper›PMID 9372927›Full record

ArticleMolecular and cellular biology1997

A heterologous maize rpoB editing site is recognized by transgenic tobacco chloroplasts.

M L Reed, M R Hanson

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
0.4field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
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  3. Chloroplast ribonucleoprotein CP31A is required for editing and stability of specific chloroplast mRNAs.Proceedings of the National Academy of Sciences of the United States of America · 2009
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  11. Eukaryotic genome evolution: rearrangement and coevolution of compartmentalized genetic information.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2003
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

M L ReedSection of Genetics and Development, Cornell University, Ithaca, New York 14853, USA.
M R Hanson
Cornell University · US

Funding

RNA EDITING IN PLANT ORGANELLESR01GM050723 · NIGMS · CORNELL UNIVERSITY ITHACA · PI HANSON, MAUREEN R · 1994 to 2001
$587k
NIGMS NIH HHS GM17743NIGMS NIH HHS R01GM50723
6 · The paper itself

Abstract

Single nucleotides in plant chloroplast transcripts are edited from the genomically encoded C to U, often resulting in changes of the encoded protein sequence. Site-specific trans-acting factors are postulated to direct the selection of edited residues. In order to further define cis sequences required for RNA editing, we investigated whether two editing sites present in maize rpoB mRNA would be recognized by the editing machinery of transformed tobacco chloroplasts. A 93-nucleotide (nt) segment surrounding site I is sufficient to direct editing of the maize sequence in tobacco chloroplasts. However, an 86-nt segment surrounding maize site IV (which is genomically encoded as a T in tobacco) does not confer editing of this site, suggesting that trans-acting factors necessary for recognition of site IV are not present in tobacco. The maize sequences surrounding site I were found to compete with the endogenous rpoB for a depletable trans factor and to reduce editing of endogenous site I. The presence of exogenous maize site I was also found to decrease editing of endogenous tobacco site II, indicating that there is a shared aspect of editing for some closely spaced editing sites.

Indexed as

Base SequenceBinding SitesChloroplastsDNA-Directed RNA PolymerasesDNA, PlantMolecular Sequence DataNicotianaPlant ProteinsPlants, Genetically ModifiedPlants, ToxicRNA EditingRNA, PlantTranscription, GeneticTransformation, GeneticZea maysDNA-Directed RNA PolymerasesDNA, PlantPlant ProteinsRNA, PlantRpoB protein, Oryza sativa

Identifiers

PMID9372927
PMCPMC232552
OpenAlexW2156415188

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.