Evidence map›Paper›PMID 9371622›Full record

ArticleJournal of virology1997

Identification of two independent transcriptional activation domains in the Autographa californica multicapsid nuclear polyhedrosis virus IE1 protein.

J M Slack, G W Blissard

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
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  3. Identification of the Key Functional Domains ofInternational journal of molecular sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

J M SlackBoyce Thompson Institute, Cornell University, Ithaca, New York 14853, USA.
G W Blissard
Cornell University · US

Funding

FUNCTION OF THE BACULOVIRUS MEMBRANE FUSION PROTEINR01AI033657 · NIAID · BOYCE THOMPSON INST FOR PLANT RESEARCH · PI BLISSARD, GARY W · 1993 to 2009
$1.6M
Baculovirus envelope proteins and insect cellsR21AI033657 · NIAID · BOYCE THOMPSON INST FOR PLANT RESEARCH · PI BLISSARD, GARY W · 2004 to 2004
$189k
NIAID NIH HHS AI33657NIAID NIH HHS R01 AI033657
6 · The paper itself

Abstract

The Autographa californica multicapsid nuclear polyhedrosis virus immediate-early protein, IE1, is a 582-amino-acid phosphoprotein that regulates the transcription of early viral genes. Deletion of N-terminal regions of IE1 in previous studies (G. R. Kovacs, J. Choi, L. A. Guarino, and M. D. Summers, J. Virol. 66:7429-7437, 1992) resulted in the loss of transcriptional activation, suggesting that this region may contain an acidic activation domain. To identify independently functional transcriptional activation domains, we developed a heterologous system in which potential regulatory domains were fused with a modified Escherichia coli Lac repressor protein that contains a nuclear localization signal (NLacR). Transcriptional activation by the resulting NLacR-IE1 chimeras was measured with a basal baculovirus early promoter containing optimized Lac repressor binding sites (lac operators). Chimeras containing IE1 peptides dramatically activated transcription of the basal promoter only when lac operator sequences were present. In addition, transcriptional activation by NLacR-IE1 chimeras was allosterically regulated by the lactose analog, isopropyl-beta-D-thiogalactopyranoside (IPTG). For a more detailed analysis of IE1 regulatory domains, the M1 to T266 N-terminal portion of IE1 was subdivided (on the basis of average amino acid charge) into five smaller regions which were fused in various combinations to NLacR. Regions M1 to N125 and A168 to G222 were identified as independent transcriptional activation domains. Some NLacR-IE1 chimeras exhibited retarded migration in sodium dodecyl sulfate-polyacrylamide gel electrophoresis gels. As with wild-type IE1, this aberrant gel mobility was associated with phosphorylation. Mapping studies with the NLacR-IE1 chimeras indicate that the M1 to A168 region of IE1 is necessary for this phosphorylation-associated effect.

Indexed as

DNA-Binding ProteinsEscherichia coli ProteinsTranscriptional ActivationAmino Acid SequenceAnimalsBacterial ProteinsBinding SitesCell LineChloramphenicol O-AcetyltransferaseImmediate-Early ProteinsIsopropyl ThiogalactosideLac RepressorsMolecular Sequence DataMothsNucleopolyhedrovirusesOperator Regions, GeneticAc-IE-1 protein, Autographa californica nucleopolyhedrovirusBacterial ProteinsChloramphenicol O-AcetyltransferaseDNA-Binding ProteinsEscherichia coli ProteinsImmediate-Early ProteinsIsopropyl ThiogalactosideLac RepressorsRecombinant Fusion ProteinsRepressor ProteinsTrans-Activators

Identifiers

PMID9371622
PMCPMC230266
OpenAlexW1522694799

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.