Evidence map›Paper›PMID 9371616›Full record

ArticleJournal of virology1997

Activation of the T-cell receptor signaling pathway by Nef from an aggressive strain of simian immunodeficiency virus.

W Luo, B M Peterlin

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.7field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 57 citations in OpenAlex.

  1. Article
  2. T-Cell Signaling in HIV-1 Infection.The open virology journal · 2013
    Article
  3. HIV-1 Nef: a multifaceted modulator of T cell receptor signaling.Cell communication and signaling : CCS · 2012
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

W LuoDepartment of Medicine, Microbiology and Immunology, Howard Hughes Medical Institute, University of California at San Francisco, 94143-0703, USA.
B M Peterlin
Howard Hughes Medical Institute · US

Funding

IN VITRO AND IN VIVO FUNCTION OF HIV AND SIV NEF GENESR01AI038532 · NIAID · UNIVERSITY OF CALIFORNIA DAVIS · PI LUCIW, PAUL A · 1995 to 2002
$1.8M
NIAID NIH HHS 1RO1AI38532-01
6 · The paper itself

Abstract

The Nef from a highly virulent strain of simian immunodeficiency virus (SIV), SIVpbj14, and a Nef from the traditional strain SIVmac239 bearing the mutation from RQ to YE (YE-Nef) both induce an acute lethal disease in monkeys. The YE mutation and its surrounding sequence resemble the immunoreceptor tyrosine-based activation motif (ITAM), which is present in the cytoplasmic tail of T- and B-cell antigen receptors and mediates signaling during lymphocyte activation. We show here that the ITAM from YE-Nef performs the same function. First, not only does YE-Nef increase the activity of the transcription factor NFAT, which is one of the downstream targets of T-cell activation, but the ITAM from the YE-Nef by itself also activates NFAT. Second, the ITAM from YE-Nef is phosphorylated on tyrosine residues by Lck and associates with ZAP-70, a T-cell-specific tyrosine kinase. The phosphorylation of both conserved tyrosine residues on the ITAM is required for the recruitment of ZAP-70. Finally, Lck is required for the activation of NFAT by YE-Nef. These results demonstrate that YE-Nef contains a functional ITAM and elucidate the molecular mechanisms underlying the pathogenesis of SIVpbj14.

Indexed as

Lymphocyte ActivationSignal TransductionAmino Acid SequenceAnimalsCOS CellsGene Products, nefHumansJurkat CellsLymphocyte Specific Protein Tyrosine Kinase p56(lck)Molecular Sequence DataPhosphorylationProtein-Tyrosine KinasesReceptors, Antigen, T-CellSimian Immunodeficiency VirusTyrosineZAP-70 Protein-Tyrosine KinaseGene Products, nefLymphocyte Specific Protein Tyrosine Kinase p56(lck)Protein-Tyrosine KinasesReceptors, Antigen, T-CellTyrosineZAP70 protein, humanZAP-70 Protein-Tyrosine Kinase

Identifiers

PMID9371616
PMCPMC230260
OpenAlexW2170393993

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.