Evidence map›Paper›PMID 9359827›Full record

ReviewThe Biochemical journal1997

The DNA damage-recognition problem in human and other eukaryotic cells: the XPA damage binding protein.

J E Cleaver, J C States

Open access · greenAbstract readReview
In one paragraph

Review in The Biochemical journal, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 96 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. The Reactions of HMolecules (Basel, Switzerland) · 2020
    Article
  6. Mapping p38α mitogen-activated protein kinase signaling by proximity-dependent labeling.Protein science : a publication of the Protein Society · 2020
    Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Redefining the DNA-binding domain of human XPA.Journal of the American Chemical Society · 2014
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Other proteins interacting with XP proteins.Advances in experimental medicine and biology · 2008
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

J E CleaverLaboratory of Radiobiology and Environmental Health, University of California, San Francisco 94143-0750, USA.
J C States
University of California, San Francisco · USWayne State University · US

Funding

DNA DAMAGE BY BIOACTIVATED XENOBIOTICSR01ES006460 · NIEHS · WAYNE STATE UNIVERSITY · PI STATES, J CHRISTOPHER · 1997 to 2000
$213k
NIEHS NIH HHS ES06460
6 · The paper itself

Abstract

The capacity of human and other eukaryotic cells to recognize a disparate variety of damaged sites in DNA, and selectively excise and repair them, resides in a deceptively small simple protein, a 38-42 kDa zinc-finger binding protein, XPA (xeroderma pigmentosum group A), that has no inherent catalytic properties. One key to its damage-recognition ability resides in a DNA-binding domain which combines a zinc finger and a single-strand binding region which may infiltrate small single-stranded regions caused by helix-destabilizing lesions. Another is the augmentation of its binding capacity by interactions with other single-stranded binding proteins and helicases which co-operate in the binding and are unloaded at the binding site to facilitate further unwinding of the DNA and subsequent catalysis. The properties of these reactions suggest there must be considerable conformational changes in XPA and associated proteins to provide a flexible fit to a wide variety of damaged structures in the DNA.

Indexed as

DNA DamageDNA RepairAnimalsDNA-Binding ProteinsEukaryotic CellsGene Expression RegulationHumansModels, GeneticMutationSubstrate SpecificityXeroderma PigmentosumXeroderma Pigmentosum Group A ProteinDNA-Binding ProteinsXeroderma Pigmentosum Group A ProteinXPA protein, human

Identifiers

PMID9359827
PMCPMC1218880
OpenAlexW1798376596

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.