Evidence map›Paper›PMID 9343433›Full record

ArticleMolecular and cellular biology1997

The ubiquitin-conjugating enzyme Rad6 (Ubc2) is required for silencing in Saccharomyces cerevisiae.

H Huang, A Kahana, D E Gottschling, L Prakash, S W Liebman

Abstract read
In one paragraph

Article in Molecular and cellular biology, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed.

  1. Article
  2. Article
  3. Paf1 complex subunit Rtf1 stimulates H2B ubiquitylation by interacting with the highly conserved N-terminal helix of Rad6.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  4. Review
  5. More Than Just Cleaning: Ubiquitin-Mediated Proteolysis in Fungal Pathogenesis.Frontiers in cellular and infection microbiology · 2021
    Review
  6. The Epigenetic Pathways to Ribosomal DNA Silencing.Microbiology and molecular biology reviews : MMBR · 2016
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

H HuangDepartment of Biological Sciences, University of Illinois at Chicago, 60607, USA.
A Kahana
D E Gottschling
L Prakash
S W Liebman

Funding

DISSECTION OF TELOMERE ATTRIBUTES IN S. CEREVISIAER01GM043893 · NIGMS · UNIVERSITY OF CHICAGO · PI GOTTSCHLING, DANIEL E. · 1991 to 2009
$4.5M
REPAIR OF DNA DAMAGED BY UV IRRADIATION IN YEASTR01GM019261 · NIGMS · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI PRAKASH, LOUISE · 1985 to 2003
$1.4M
HOST GENES AFFECTING TYL TRANSPOSITIONR01GM050365 · NIGMS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI LIEBMAN, SUSAN W. · 1994 to 1997
–
NIGMS NIH HHS GM19261NIGMS NIH HHS GM43893NIGMS NIH HHS GM50365
6 · The paper itself

Abstract

It has been previously shown that genes transcribed by RNA polymerase II (RNAP II) are subject to position effect variegation when located near yeast telomeres. This telomere position effect requires a number of gene products that are also required for silencing at the HML and HMR loci. Here, we show that a null mutation of the DNA repair gene RAD6 reduces silencing of the HM loci and lowers the mating efficiency of MATa strains. Likewise, rad6-delta reduces silencing of the telomere-located RNAP II-transcribed genes URA3 and ADE2. We also show that the RNAP III-transcribed tyrosyl tRNA gene, SUP4-o, is subject to position effect variegation when located near a telomere and that this silencing requires the RAD6 and SIR genes. Neither of the two known Rad6 binding factors, Rad18 and Ubr1, is required for telomeric silencing. Since Ubrl is the recognition component of the N-end rule-dependent protein degradation pathway, this suggests that N-end rule-dependent protein degradation is not involved in telomeric silencing. Telomeric silencing requires the amino terminus of Rad6. Two rad6 point mutations, rad6(C88A) and rad6(C88S), which are defective in ubiquitin-conjugating activity fail to complement the silencing defect, indicating that the ubiquitin-conjugating activity of RAD6 is essential for full telomeric silencing.

Indexed as

Gene Expression Regulation, FungalGenome, FungalSaccharomyces cerevisiae ProteinsUbiquitin-Protein LigasesDNA-Binding ProteinsFungal ProteinsGene DeletionGenes, FungalLigasesLipoproteinsMating FactorPeptidesPheromonesRNA Polymerase IIRNA Polymerase IIISaccharomyces cerevisiaeDNA-Binding ProteinsFungal ProteinsLigasesLipoproteinsMating FactorMFA2 protein, S cerevisiaePeptidesPheromonesRAD18 protein, S cerevisiaeRAD6 protein, S cerevisiaeRNA Polymerase IIRNA Polymerase IIISaccharomyces cerevisiae ProteinsUbiquitin-Conjugating EnzymesUbiquitin-Protein LigasesUbiquitinsUBR1 protein, S cerevisiae

Identifiers

PMID9343433
PMCPMC232523

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.