Evidence map›Paper›PMID 9334315›Full record

ArticleGenes & development1997

Intergenic transcription and transinduction of the human beta-globin locus.

H L Ashe, J Monks, M Wijgerde, P Fraser, N J Proudfoot

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 155 papers.

0numbers the graph read from it
0cells of the map it votes in
155citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

155 citing papers in PubMed, 328 citations in OpenAlex.

  1. Article
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  6. Enhancer-Mediated Formation of Nuclear Transcription Initiation Domains.International journal of molecular sciences · 2022
    Review
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95 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

H L AsheSir William Dunn School of Pathology, University of Oxford, UK.
J Monks
M Wijgerde
P Fraser
N J Proudfoot
Rotterdam University of Applied Sciences · NLUniversity of Oxford · GBErasmus University Rotterdam · NL

Funding

Wellcome Trust
6 · The paper itself

Abstract

We have identified novel nuclear transcripts in the human beta-globin locus using nuclear run-on analysis in erythroid cell lines and in situ hybridization analysis of erythroid tissue. These transcripts extend across the LCR and intergenic regions but are undetectable in nonerythroid cells. Surprisingly, transient transfection of a beta-globin gene (epsilon, gamma, or beta) induces transcription of the LCR and intergenic regions from the chromosomal beta-globin locus in nonerythroid cell lines. The beta-globin genes themselves, however, remain transcriptionally silent. Induction is dependent on transcription of the globin gene in the transfected plasmid but does not require protein expression. Using in situ hybridization analysis, we show that the plasmid colocalizes with the endogenous beta-globin locus providing insight into the mechanism of transinduction.

Indexed as

Gene Expression RegulationTranscription, GeneticAnimalsCell LineDNA ProbesDNA, Single-StrandedErythrocytesGlobinsHumansIn Situ Hybridization, FluorescenceLiverLocus Control RegionMiceMice, TransgenicPlasmidsTransfectionDNA ProbesDNA, Single-StrandedGlobins

Identifiers

PMID9334315
PMCPMC316561
OpenAlexW2114752899

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.