Evidence map›Paper›PMID 9311788›Full record

ArticleJournal of virology1997

Mutational analysis of the virion host shutoff gene (UL41) of herpes simplex virus (HSV): characterization of HSV type 1 (HSV-1)/HSV-2 chimeras.

D N Everly, G S Read

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Journal of virology, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 50 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

D N EverlySchool of Biological Sciences, University of Missouri-Kansas City, 64110, USA.
G S Read
University of Missouri–Kansas City · US

Funding

TRANSLATIONAL CONTROL IN HSV INFECTED CELLSR01AI021501 · NIAID · UNIVERSITY OF MISSOURI KANSAS CITY · PI READ, G. SULLIVAN · 1985 to 2008
$1.7M
Control of mRNA Stability in HSV Infected CellsR21AI021501 · NIAID · UNIVERSITY OF MISSOURI KANSAS CITY · PI READ, G. SULLIVAN · 2003 to 2003
$252k
NIAID NIH HHS AI21501
6 · The paper itself

Abstract

During lytic herpes simplex virus (HSV) infections, the half-lives of host and viral mRNAs are regulated by the HSV virion host shutoff (Vhs) protein (UL41). The sequences of the UL41 polypeptides of HSV type 1 (HSV-1) strain KOS and HSV-2 strain 333 are 87% identical. In spite of this similarity, HSV-2 strains generally shut off the host more rapidly and completely than HSV-1 strains. To examine type-specific differences in Vhs function, we compared the Vhs activities of UL41 alleles from HSV-1(KOS) and HSV-2(333) by assaying the ability of a transfected UL41 allele to inhibit expression of a cotransfected reporter gene. Both HSV-1 and HSV-2 alleles inhibited reporter gene expression over a range of vhs DNA concentrations. However, 40-fold less of the HSV-2 allele was required to yield the same level of inhibition as HSV-1, indicating that it is significantly more potent. Examination of chimeric UL41 alleles containing various combinations of HSV-1 and HSV-2 sequences identified three regions of the 333 polypeptide which increase the activity of KOS when substituted for the corresponding amino acids of the KOS protein. These are separated by two regions which have no effect on KOS activity, even though they contain 43 of the 74 amino acid differences between the parental alleles. In addition, alleles encoding a full-length KOS polypeptide with a 32-amino-acid N-terminal extension retain considerable activity. The results begin to identify which amino acid differences are responsible for type-specific differences in Vhs activity.

Indexed as

AllelesAlphaherpesvirinaeAmino Acid SequenceAnimalsBase SequenceChlorocebus aethiopsConserved SequenceDNA Mutational AnalysisGenes, ReporterGenes, ViralMolecular Sequence DataMutagenesis, Site-DirectedRecombinant Fusion ProteinsRestriction MappingSequence AlignmentSequence Homology, Amino Acidherpes simplex virus type 2 protein UL41Recombinant Fusion ProteinsUl41 protein, Human herpesvirus 1Viral Proteins

Identifiers

PMID9311788
PMCPMC192055
OpenAlexW2107680679

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.