Evidence map›Paper›PMID 9305624›Full record

ArticleThe EMBO journal1997

Random mutagenesis reveals a region important for gating of the yeast K+ channel Ykc1.

S H Loukin, B Vaillant, X L Zhou, E P Spalding, C Kung, Y Saimi

Abstract read
In one paragraph

Article in The EMBO journal, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

  1. Article
  2. Review
  3. TOK channels use the two gates in classical KFASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2020
    Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Alkali metal cation transport and homeostasis in yeasts.Microbiology and molecular biology reviews : MMBR · 2010
    Review
  11. Review
  12. Article
  13. Ion channels in microbes.Physiological reviews · 2008
    Review
  14. Article
  15. Article
  16. Article
  17. Yeast screens show aromatic residues at the end of the sixth helix anchor transient receptor potential channel gate.Proceedings of the National Academy of Sciences of the United States of America · 2007
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

S H LoukinLaboratory of Molecular Biology, University of Wisconsin, Madison 53706, USA.
B Vaillant
X L Zhou
E P Spalding
C Kung
Y Saimi

Funding

MOLECULAR GENETICS OF PARAMECIUMR01GM022714 · NIGMS · UNIVERSITY OF WISCONSIN MADISON · PI KUNG, CHING · 1985 to 2002
$729k
NIGMS NIH HHS GM 22714PHS HHS 36386
6 · The paper itself

Abstract

YKC1 (TOK1, DUK1, YORK) encodes the outwardly rectifying K+ channel of the yeast plasma membrane. Non-targeted mutations of YKC1 were isolated by their ability to completely block proliferation when expressed in yeast. All such mutations examined occurred near the cytoplasmic ends of the transmembrane segments following either of the duplicated P loops, which we termed the 'post-P loop' (PP) regions. These PP mutations specifically caused marked defects in the 'C1' states, a set of interrelated closed states that Ykc1 enters and exits at rates of tens to hundreds of milliseconds. These results indicate that the Ykc1 PP region plays a role in determining closed state conformations and that non-targeted mutagenesis and microbial selection can be a valuable tool for probing structure-function relationships of ion channels.

Indexed as

Ion Channel GatingMutagenesisSaccharomyces cerevisiae ProteinsAmino Acid SequenceAnimalsFungal ProteinsMolecular Sequence DataOocytesPatch-Clamp TechniquesPlasmidsPotassium ChannelsSaccharomyces cerevisiaeSequence AlignmentSequence Analysis, DNAStructure-Activity RelationshipTransfectionFungal ProteinsPotassium ChannelsSaccharomyces cerevisiae ProteinsTOK1 protein, S cerevisiaeNon-programmatic

Identifiers

PMID9305624
PMCPMC1170117

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.