Evidence map›Paper›PMID 9286670›Full record

ArticleGenetics1997

In vivo analysis of Saccharomyces cerevisiae COX2 mRNA 5'-untranslated leader functions in mitochondrial translation initiation and translational activation.

H M Dunstan, N S Green-Willms, T D Fox

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 59 citations in OpenAlex.

  1. A Correlation between 3'-UTR ofJournal of fungi (Basel, Switzerland) · 2023
    Article
  2. Article
  3. Molecular and cellular biology · 2021
    Article
  4. Article
  5. Article
  6. Article
  7. The Cox1 C-terminal domain is a central regulator of cytochromeThe Journal of biological chemistry · 2017
    Article
  8. Review
  9. Protein biosynthesis in mitochondria.Biochemistry. Biokhimiia · 2013
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

H M DunstanSection of Genetics and Development, Cornell University, Ithaca, New York 14853-2703, USA.
N S Green-Willms
T D Fox
Cornell University · US

Funding

TRANSLATIONAL CONTROL OF YEAST MITOCHONDRIAL GENESR01GM029362 · NIGMS · CORNELL UNIVERSITY ITHACA · PI FOX, THOMAS DAVID · 1985 to 2013
$6.1M
NIGMS NIH HHS GM-07617NIGMS NIH HHS GM-29362
6 · The paper itself

Abstract

We have used mutational and revertant analysis to study the elements of the 54-nucleotide COX2 5'-untranslated leader involved in translation initiation in yeast mitochondria and in activation by the COX2 translational activator. Pet111p. We generated a collection of mutants with substitutions spanning the entire COX2 5'-UTL by in vitro mutagenesis followed by mitochondrial transformation and gene replacement. The phenotypes of these mutants delimit a 31-nucleotide segment, from -16 to -46, that contains several short sequence elements necessary for COX2 5'-UTL function in translation. The sequences from -16 to -47 were shown to be partially sufficient to promote translation in a foreign context. Analysis of revertants of both the series of linker-scanning alleles and two short deletion/ insertion alleles has refined the positions of several possible functional elements of the COX2 5'-untranslated leader, including a putative RNA stem-loop structure that functionally interacts with Pet111p and an octanucleotide sequence present in all S. cerevisiae mitochondrial mRNA 5'-UTLs that is a potential rRNA binding site.

Indexed as

Saccharomyces cerevisiae ProteinsBase SequenceElectron Transport Complex IVFungal ProteinsGene Expression Regulation, FungalMembrane ProteinsMitochondriaMitochondrial ProteinsMolecular Sequence DataMutationNuclear ProteinsNucleic Acid ConformationPeptide Initiation FactorsPhenotypeProtein BiosynthesisRNA, FungalElectron Transport Complex IVFungal ProteinsMembrane ProteinsMitochondrial ProteinsNuclear ProteinsPeptide Initiation FactorsPET111 protein, S cerevisiaeRNA, FungalRNA, MessengerSaccharomyces cerevisiae Proteins

Identifiers

PMID9286670
PMCPMC1208125
OpenAlexW1952617123

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.