ArticleProceedings of the National Academy of Sciences of the United States of America1997
Sequence of a 189-kb segment of the chromosome of Rhodobacter capsulatus SB1003.
Article in Proceedings of the National Academy of Sciences of the United States of America, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
16 citing papers in PubMed, 43 citations in OpenAlex.
- Reconstructing the hydrogenobyrinic acid synthetic toolkit by combining cell-free systems and metabolic engineering.Synthetic and systems biotechnology · 2026Article
- A synthetic cell-free 36-enzyme reaction system for vitamin BNature communications · 2023Article
- Rhodobacterales use a unique L-threonine kinase for the assembly of the nucleotide loop of coenzyme BMolecular microbiology · 2018Article
- Loss of the response regulator CtrA causes pleiotropic effects on gene expression but does not affect growth phase regulation in Rhodobacter capsulatus.Journal of bacteriology · 2010Article
- Cloning and expression of afpA, a gene encoding an antifreeze protein from the arctic plant growth-promoting rhizobacterium Pseudomonas putida GR12-2.Journal of bacteriology · 2004Article
- Biochemical, molecular, and genetic analyses of the acetone carboxylases from Xanthobacter autotrophicus strain Py2 and Rhodobacter capsulatus strain B10.Journal of bacteriology · 2002Article
- Fructose uptake in Sinorhizobium meliloti is mediated by a high-affinity ATP-binding cassette transport system.Journal of bacteriology · 2001Article
- The Rhodobacter capsulatus genome.Photosynthesis research · 2001Article
- The complete DNA sequence and analysis of R27, a large IncHI plasmid from Salmonella typhi that is temperature sensitive for transfer.Nucleic acids research · 2000Article
- Complete nucleotide sequence of Tn10.Journal of bacteriology · 2000Article
- Functional analysis of gapped microbial genomes: amino acid metabolism of Thiobacillus ferrooxidans.Proceedings of the National Academy of Sciences of the United States of America · 2000Article
- Genetic analysis of a bacterial genetic exchange element: the gene transfer agent of Rhodobacter capsulatus.Proceedings of the National Academy of Sciences of the United States of America · 2000Article
- WIT: integrated system for high-throughput genome sequence analysis and metabolic reconstruction.Nucleic acids research · 2000Article
- Anaerobic growth of Paracoccus denitrificans requires cobalamin: characterization of cobK and cobJ genes.Journal of bacteriology · 1999Article
- Sulfide-quinone reductase from Rhodobacter capsulatus: requirement for growth, periplasmic localization, and extension of gene sequence analysis.Journal of bacteriology · 1999Article
- The membrane-attached electron carrier cytochrome cy from Rhodobacter sphaeroides is functional in respiratory but not in photosynthetic electron transfer.Proceedings of the National Academy of Sciences of the United States of America · 1999Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
6 authors at 3 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Cosmids from the 1A3-1A10 region of the complete miniset were individually subcloned by using the vector M13 mp18. Sequences of each cosmid were assembled from about 400 DNA fragments generated from the ends of these phage subclones and merged into one 189-kb contig. About 160 ORFs identified by the CodonUse program were subjected to similarity searches. The biological functions of 80 ORFs could be assigned reliably by using the WIT and Magpie genome investigation tools. Eighty percent of these recognizable ORFs were organized in functional clusters, which simplified assignment decisions and increased the strength of the predictions. A set of 26 genes for cobalamin biosynthesis, genes for polyhydroxyalkanoic acid metabolism, DNA replication and recombination, and DNA gyrase were among those identified. Most of the ORFs lacking significant similarity with reference databases also were grouped. There are two large clusters of these ORFs, one located between 45 and 67 kb of the map, and the other between 150 and 183 kb. Nine of the loosely identified ORFs (of 15) of the first of these clusters match ORFs from phages or transposons. The other cluster also has four ORFs of possible phage origin.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.