Evidence map›Paper›PMID 9234738›Full record

ArticleMolecular and cellular biology1997

Two evolutionarily conserved repression domains in the Drosophila Kruppel protein differ in activator specificity.

W Hanna-Rose, J D Licht, U Hansen

Abstract read
In one paragraph

Article in Molecular and cellular biology, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. EVOPRINTER, a multigenomic comparative tool for rapid identification of functionally important DNA.Proceedings of the National Academy of Sciences of the United States of America · 2005
    Article
  6. Article
  7. Cell-type specificity of short-range transcriptional repressors.Proceedings of the National Academy of Sciences of the United States of America · 2001
    Article
  8. Article
  9. Article
  10. Article
  11. Transcription repression by Xenopus ET and its human ortholog TBX3, a gene involved in ulnar-mammary syndrome.Proceedings of the National Academy of Sciences of the United States of America · 1999
    Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

W Hanna-RoseDana-Farber Cancer Institute and Department of Microbiology and Molecular Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA.
J D Licht
U Hansen

Funding

Tumor Cell Biology Training ProgramT32CA009361 · NCI · DANA-FARBER CANCER INSTITUTE · PI GRAY, NATHANAEL SCHIANDER · 1985 to 2015
$8.9M
MOLECULAR CLONING OF A EUKARYOTIC TRANSCRIPTION FACTORK11CA001272 · NCI · MOUNT SINAI SCHOOL OF MEDICINE OF CUNY · PI LICHT, JONATHAN D. · 1987 to 1991
–
NCI NIH HHS CA-01272NCI NIH HHS T32-CA09361
6 · The paper itself

Abstract

To identify biologically functional regions in the product of the Drosophila melanogaster gene Kruppel, we cloned the Kruppel homolog from Drosophila virilis. Both the previously identified amino (N)-terminal repression region and the DNA-binding region of the D. virilis Kruppel protein are greater than 96% identical to those of the D. melanogaster Kruppel protein, demonstrating a selective pressure to maintain the integrity of each region during 60 million to 80 million years of evolution. An additional region in the carboxyl (C) terminus of Kruppel that was most highly conserved was examined further. A 42-amino-acid stretch within the conserved C-terminal region also encoded a transferable repression domain. The short, C-terminal repression region is a composite of three subregions of distinct amino acid composition, each containing a high proportion of either basic, proline, or acidic residues. Mutagenesis experiments demonstrated, unexpectedly, that the acidic residues contribute to repression function. Both the N-terminal and C-terminal repression regions were tested for the ability to affect transcription mediated by a variety of activator proteins. The N-terminal repression region was able to inhibit transcription in the presence of multiple activators. However, the C-terminal repression region inhibited transcription by only a subset of the activator proteins. The different activator specificities of the two regions suggest that they repress transcription by different mechanisms and may play distinct biological roles during Drosophila development.

Indexed as

Saccharomyces cerevisiae ProteinsTranscription, GeneticAmino AcidsAmino Acid SequenceAnimalsBase SequenceCell LineCloning, MolecularConserved SequenceDNA-Binding ProteinsDrosophilaDrosophila melanogasterDrosophila ProteinsGenes, InsectHumansKruppel-Like Transcription FactorsAmino AcidsDNA-Binding ProteinsDrosophila ProteinsGAL4 protein, S cerevisiaeKr protein, DrosophilaKruppel-Like Transcription FactorsRecombinant Fusion ProteinsRepressor ProteinsSaccharomyces cerevisiae ProteinsTrans-ActivatorsTranscription Factors

Identifiers

PMID9234738
PMCPMC232334

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.