Evidence map›Paper›PMID 9215897›Full record

ArticleGenetics1997

Topological constraints on transvection between white genes within the transposing element TE35B in Drosophila melanogaster.

D Gubb, J Roote, J Trenear, D Coulson, M Ashburner

Abstract read
In one paragraph

Article in Genetics, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Enhancer action in trans is permitted throughout the Drosophila genome.Proceedings of the National Academy of Sciences of the United States of America · 2002
    Article
  7. Article
  8. Article
  9. Article
  10. Two modes of transvection: enhancer action in trans and bypass of a chromatin insulator in cis.Proceedings of the National Academy of Sciences of the United States of America · 1998
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

D GubbDepartment of Genetics, University of Cambridge, United Kingdom. d.gubb@gen.cam.ac.uk
J Roote
J Trenear
D Coulson
M Ashburner

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The transposable element TE35B carries two copies of the white (w) gene at 35B1.2 on the second chromosome. These w genes are suppressed in zeste-1 (z1) mutant background in a synapsis-dependent manner. Single-copy derivatives of the original TE35B stock give red eyes when heterozygous, but zeste eyes when homozygous. TE35B derivatives carrying single, double or triple copies of w were crossed to generate flies carrying from two to five ectopic w genes. Within this range, z1-mediated suppression is insensitive to copynumber and does not distinguish between w genes that are in cis or in trans. Suppression does not require the juxtaposition of even numbers of w genes, but is extremely sensitive to chromosomal topology. When arranged in a tight cluster, in triple-copy TE derivatives, w genes are nonsuppressible. Breakpoints falling within TE35B and separating two functional w genes act as partial suppressors of z1. Similarly, breakpoints immediately proximal or distal to both w genes give partial suppression. This transvection-dependent downregulation of w genes may result from mis-activation of the X-chromosome dosage compensation mechanism.

Indexed as

ATP-Binding Cassette TransportersDNA Transposable ElementsDrosophila ProteinsEye ProteinsGenes, InsectTransfectionAnimalsChromosome AberrationsChromosome MappingCrosses, GeneticDrosophila melanogasterFemaleInsect ProteinsMaleMutationNucleic Acid ConformationATP-Binding Cassette TransportersDNA Transposable ElementsDrosophila ProteinsEye ProteinsInsect ProteinsPigments, Biologicalw protein, Drosophila

Identifiers

PMID9215897
PMCPMC1208061

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.