Evidence map›Paper›PMID 9214634›Full record

ArticleThe EMBO journal1997

KARP-1: a novel leucine zipper protein expressed from the Ku86 autoantigen locus is implicated in the control of DNA-dependent protein kinase activity.

K Myung, D M He, S E Lee, E A Hendrickson

Abstract readComparative Study
In one paragraph

Article in The EMBO journal, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Ku86 is essential in human somatic cells.Proceedings of the National Academy of Sciences of the United States of America · 2002
    Article
  10. Review
  11. Article
  12. KARP-1 is induced by DNA damage in a p53- and ataxia telangiectasia mutated-dependent fashion.Proceedings of the National Academy of Sciences of the United States of America · 1998
    Article
  13. Review
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

K MyungDepartment of Molecular Biology, Cell Biology and Biochemistry, Brown University, Providence, RI 02912, USA.
D M He
S E Lee
E A Hendrickson
John Brown University · US

Funding

RECOMBINATION AND DNA REPAIR MUTANTSR01AI035763 · NIAID · UNIVERSITY OF MINNESOTA TWIN CITIES · PI HENDRICKSON, ERIC A · 1994 to 2001
$590k
NIAID NIH HHS AI35763
6 · The paper itself

Abstract

The Ku autoantigen plays an integral role in mammalian DNA double-strand break repair as the DNA binding component of the DNA-dependent protein kinase (DNA-PK) complex. Here, we demonstrate that a second gene, KARP-1 (Ku86 Autoantigen Related Protein-1), is expressed from the Ku86 locus. The KARP-1 gene utilizes an upstream promoter and additional exons which results in an extra 9 kDa of protein appended onto the normal Ku86 polypeptide. The KARP-1-specific domain encodes interdigitating hexa- and penta-heptad repeats of leucine residues flanked by a very basic region. Intriguingly, the catalytic subunit of DNA-PK also contains a hexa-heptad repeat of leucines. Consistent with this observation, we observed that human cell lines stably expressing dominant-negative constructs of KARP-1 resulted in diminished DNA-PK activity and X-ray hypersensitivity and that a KARP-1 antibody significantly neutralized DNA-PK activity in vitro. Finally, we present data which suggests that KARP-1 may be primate-specific. These observations have important repercussions for mammalian DNA double-strand break repair.

Indexed as

Antigens, NuclearDNA HelicasesLeucine ZippersAmino Acid SequenceAnimalsAutoantigensBase SequenceCarrier ProteinsCricetinaeDNA-Activated Protein KinaseDNA-Binding ProteinsDNA, ComplementaryDNA RepairHumansKu AutoantigenModels, GeneticAntigens, NuclearAutoantigensCarrier ProteinsDNA-Activated Protein KinaseDNA-Binding ProteinsDNA, ComplementaryDNA HelicasesKu AutoantigenNuclear ProteinsPRKDC protein, humanProtein Serine-Threonine KinasesRNA, MessengerXRCC5 protein, humanXrcc6 protein, human

Identifiers

PMID9214634
PMCPMC1169935
OpenAlexW2126031099

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.