Evidence map›Paper›PMID 9199283›Full record

ArticleMolecular and cellular biology1997

Coordinate transcription and V(D)J recombination of the kappa immunoglobulin light-chain locus: NF-kappaB-dependent and -independent pathways of activation.

D P O'Brien, E M Oltz, B G Van Ness

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Article
  3. NF-kappaB activity marks cells engaged in receptor editing.The Journal of experimental medicine · 2009
    Article
  4. Functional analysis of histone methyltransferase g9a in B and T lymphocytes.Journal of immunology (Baltimore, Md. : 1950) · 2008
    Article
  5. Article
  6. Article
  7. Review
  8. Induction of differentiation of pre-NKT cells to mature Valpha14 NKT cells by granulocyte/macrophage colony-stimulating factor.Proceedings of the National Academy of Sciences of the United States of America · 1999
    Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

D P O'BrienDepartment of Biochemistry and Institute of Human Genetics, University of Minnesota, Minneapolis 55455, USA.
E M Oltz
B G Van Ness
Institute of Human Genetics · PLVanderbilt University · US

Funding

REARRANGEMENT AND REGULATION OF IMMUNOLOBULIN GENER01GM037687 · NIGMS · UNIVERSITY OF MINNESOTA TWIN CITIES · PI VAN NESS, BRIAN G · 1986 to 1994
–
NIGMS NIH HHS GM37687
6 · The paper itself

Abstract

To further elucidate the potential role of mitogens and cytokines in regulation of the kappa immunoglobulin light-chain locus, we have characterized the activation of transcription factor binding, kappa germ line transcription, DNase I hypersensitivity, and Vkappa-to-Jkappa recombination upon induction of model pre-B-cell lines. We find that both lipopolysaccharide (LPS) and gamma interferon (IFN-gamma) are capable of activating germ line transcription, DNase I hypersensitivity, and recombination of the kappa locus. We also find that transforming growth factor beta is capable of completely inhibiting LPS activation of transcription and recombination but has no apparent effect on activation of transcription factor binding, including activation of NF-kappaB. To address the functional role of NF-kappaB in LPS and IFN-gamma induction of these events, we blocked the nuclear translocation of NF-kappaB by overexpression of a dominant negative mutant of IkappaB-alpha (IkappaB deltaN). Overexpression of the IkappaB deltaN protein results in an inhibition of LPS but not IFN-gamma activation of germ line transcription, DNase I hypersensitivity, and Vkappa-to-Jkappa recombination. Our results demonstrate that activation of NF-kappaB is necessary but not sufficient for LPS activation of transcription and recombination at kappa. These results also suggest that NF-kappaB is not required for IFN-gamma activation of transcription or recombination. These results are important in establishing that there are multiple independent pathways of activation of both transcription and recombination.

Indexed as

Gene Rearrangement, B-Lymphocyte, Light ChainGenes, ImmunoglobulinHomeodomain ProteinsRepressor ProteinsB-LymphocytesCells, CulturedDeoxyribonuclease IDNA-Binding ProteinsDNA FootprintingEnhancer Elements, GeneticGene Expression RegulationImmunoglobulin kappa-ChainsInterferon-gammaInterferon Regulatory Factor-1Interferon Regulatory Factor-2LipopolysaccharidesDeoxyribonuclease IDNA-Binding ProteinsHomeodomain ProteinsImmunoglobulin kappa-ChainsInterferon-gammaInterferon Regulatory Factor-1Interferon Regulatory Factor-2LipopolysaccharidesNF-kappa BPhosphoproteinsProto-Oncogene ProteinsRAG-1 proteinRepressor ProteinsRNA, MessengerTranscription Factor RelBTranscription FactorsV(D)J recombination activating protein 2

Identifiers

PMID9199283
PMCPMC232201
OpenAlexW2139463783

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.