Evidence map›Paper›PMID 9194180›Full record

ArticleProtein science : a publication of the Protein Society1997

Refined structure of villin 14T and a detailed comparison with other actin-severing domains.

M A Markus, P Matsudaira, G Wagner

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Protein science : a publication of the Protein Society, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. The 3D structure of villin as an unusual F-Actin crosslinker.Structure (London, England : 1993) · 2008
    Article
  5. Article
  6. Article
  7. Article
  8. Elucidating the mechanism of familial amyloidosis- Finnish type: NMR studies of human gelsolin domain 2.Proceedings of the National Academy of Sciences of the United States of America · 2000
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

M A MarkusCommittee on Higher Degrees in Biophysics, Harvard University, Boston, Massachusetts 02115, USA.
P Matsudaira
G Wagner
Harvard University · USWhitehead Institute for Biomedical Research · US

Funding

NMR STUDIES OF PROTEIN-TARGET INTERACTIONSR01GM038608 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI WAGNER, GERHARD · 1988 to 2002
$591k
STRUCTURE AND FUNCTION OF THE INTESTINE BRUSH BORDERR01DK035306 · NIDDK · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI MATSUDAIRA, PAUL T. · 1986 to 1992
–
NIDDK NIH HHS DK35306NIGMS NIH HHS GM38608
6 · The paper itself

Abstract

Villin 14T is the amino terminal actin monomer binding domain from the actin-severing and bundling protein villin. Its structure has been determined in solution using heteronuclear multidimensional nuclear magnetic resonance (NMR) spectroscopy (Markus MA, Nakayama T, Matsudaira P, Wagner G. 1994. Solution structure of villin 14T, a domain conserved among actin-severing proteins. Protein Science 3:70-81). An additional nuclear Overhauser effect (NOE) spectroscopy data set, acquired using improved gradient techniques, and further detailed analysis of existing data sets, produced an additional 601 NOE restraints for structure calculations. The overall fold does not change significantly with the additional NOE restraints but the definition of the structure is improved, as judged by smaller deviations among an ensemble of calculated structures that adequately satisfy the NMR restraints. Some of the side chains, especially those in the hydrophobic core of the domain, are much more defined. This improvement in the detail of the solution structure of villin 14T makes it interesting to compare the structure with the crystal structure of gelsolin segment 1, which shares 58% sequence identity with villin 14T, in an effort to gain insight into villin 14T's weaker affinity for actin monomers. Villin 14T has smaller side chains at several positions that make hydrophobic contacts with actin in the context of gelsolin segment 1. The structure is also compared with the structure of the related actin-severing domain, severin domain 2.

Indexed as

Cytoskeletal ProteinsProtozoan ProteinsActin Depolymerizing FactorsActinsAmino Acid SequenceCarrier ProteinsDestrinFungal ProteinsGelsolinMagnetic Resonance SpectroscopyMicrofilament ProteinsModels, MolecularMolecular Sequence DataPeptide FragmentsProtein ConformationSequence Homology, Amino AcidActin Depolymerizing FactorsActinsCarrier ProteinsCytoskeletal ProteinsDestrinFungal ProteinsGelsolinMicrofilament ProteinsPeptide FragmentsProtozoan Proteinsseverin protein, Dictyosteliumvillin

Identifiers

PMID9194180
PMCPMC2143713
OpenAlexW2088425591

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.