Evidence map›Paper›PMID 9184850›Full record

ReviewThe Histochemical journal1997

Basic strategies for valid cytometry using image analysis.

A Jonker, W J Geerts, P Chieco, A F Moorman, W H Lamers, C J Van Noorden

Open access · greenAbstract readReview
PubMed Publisher
In one paragraph

Review in The Histochemical journal, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
6.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 43 citations in OpenAlex.

  1. Whole slide image cytometry: a novel method to detect abnormal DNA content in Barrett's esophagus.Laboratory investigation; a journal of technical methods and pathology · 2015
    Article
  2. Determination of glutamate dehydrogenase activity and its kinetics in mouse tissues using metabolic mapping (quantitative enzyme histochemistry).The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society · 2014
    Article
  3. Determination of phosphate-activated glutaminase activity and its kinetics in mouse tissues using metabolic mapping (quantitative enzyme histochemistry).The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society · 2014
    Article
  4. Image analysis algorithms for immunohistochemical assessment of cell death events and fibrosis in tissue sections.The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society · 2009
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

A JonkerLaboratory of Cell Biology and Histology, University of Amsterdam, The Netherlands.
W J Geerts
P Chieco
A F Moorman
W H Lamers
C J Van Noorden
University of Amsterdam · NLAcademic Medical Center · NLRadiation Oncology Institute · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The present review provides a starting point for setting up an image analysis system for quantitative densitometry and absorbance or fluorescence measurements in cell preparations, tissue sections or gels. Guidelines for instrumental settings that are essential for the valid application of image analysis in cytophotometry and cytofluorometry are described. The general principles of the working mechanism of CCD cameras in combination with general methods to improve the behaviour of the cameras are presented. Optimization of illumination of microscopical and macroscopical objects receives special attention because of its importance for valid cytometry. Sources of errors in quantitative measurements are listed and step-by-step charts for tuning the CCD camera, frame grabber and illumination for the optimal use of the systems are described. Suggestions are given for improvement of image arithmetic in difficult imaging situations, such as low fluorescence signals and high absorbance signals.

Indexed as

Image Processing, Computer-AssistedAbsorptionCellsCell SeparationCytophotometryDensitometryFlow CytometryGelsImage CytometryMicroscopy, FluorescenceReproducibility of ResultsGels

Identifiers

PMID9184850
OpenAlexW2186462974

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.