Evidence map›Paper›PMID 9166580›Full record

ArticleMammalian genome : official journal of the International Mammalian Genome Society1997

Genealogy of the 129 inbred strains: 129/SvJ is a contaminated inbred strain.

D W Threadgill, D Yee, A Matin, J H Nadeau, T Magnuson

Abstract read
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In one paragraph

Article in Mammalian genome : official journal of the International Mammalian Genome Society, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 73 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
73citing papers in PubMed, 1 pooled it
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

73 citing papers in PubMed, 1 synthesis or guideline pooled it, 217 citations in OpenAlex.

  1. Pooled it
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  5. Review
  6. Phenotypic characteristics of commonly used inbred mouse strains.Journal of molecular medicine (Berlin, Germany) · 2020
    Review
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13 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

D W ThreadgillDepartment of Cell Biology, Vanderbilt University School of Medicine, 1161 21st Ave. S, Nashville, Tennessee 37232, USA.
D Yee
A Matin
J H Nadeau
T Magnuson
Case Western Reserve University · USUniversity School · US

Funding

MUTAGENESIS OF GENES EXPRESSED DURING MOUSE DEVELOPMENTR01HD026722 · NICHD · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI MAGNUSON, TERRY R · 1990 to 2000
$302k
NICHD NIH HHS HD26722
6 · The paper itself

Abstract

The 129 mouse is the most widely used strain in gene targeting experiments. However, numerous substrains exist with demonstrable physiological differences. In this study a set of simple sequence length polymorphisms (SSLPs) was used to determine the relatedness of selected 129 substrains. 129/SvJ was significantly different from the other 129 substrains and is more accurately classified as a recombinant congenic strain (129cX/Sv), being derived from 129/Sv and an unknown strain. This mixed genetic background could complicate gene targeting experiments by reducing homologous recombination efficiency when constructs and ES cells are not derived from the same 129 substrain. Additionally, discrepancies due to different genetic backgrounds may arise when comparing phenotypes of genes targeted in different 129-derived ES cell lines.

Indexed as

HeterozygoteIntercellular Signaling Peptides and ProteinsPolymorphism, GeneticAgouti Signaling ProteinAnimalsChromosome MappingMiceMice, Inbred C3HMice, Inbred StrainsPhenotypeProteinsRecombination, GeneticStem CellsAgouti Signaling ProteinIntercellular Signaling Peptides and ProteinsProteins

Identifiers

PMID9166580
OpenAlexW2068190035

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.