Evidence map›Paper›PMID 9153304›Full record

ArticleNucleic acids research1997

Differential in vivo activation of the class II and class III snRNA genes by the POU-specific domain of Oct-1.

S Murphy

Open access · bronzeAbstract read
In one paragraph

Article in Nucleic acids research, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 27 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

S MurphyChemical Pathology Unit, Sir William Dunn School of Pathology, South Parks Road, Oxford, OX1 3RE, UK. smurphy@worf.molbiol.ox.ac.uk

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Many snRNA genes contain binding sites for the ubiquitous transcription factor Oct-1. In vitro studies have shown that this factor potentiates binding of an essential transcription factor (PTF) to the proximal sequence element (PSE) of snRNA genes, and activates transcription. Using Gal4 fusion proteins, I show here that the POU-specific region of the DNA-binding domain of Oct-1 is sufficient both to potentiate PTF binding in vitro and to transactivate pol II- and pol III-dependent snRNA genes in vivo . A single amino acid change in this domain abrogates both activation and interaction with PTF. The N- and C-terminal regions of Oct-1 also activate transcription of both classes of snRNA genes. Wild-type levels of Pol II-dependent U2 expression require all activation domains, whereas efficient activation of the pol III-dependent 7SK and U6 genes is effected by the POU-specific domain alone. These results indicate that contacts between PTF and amino acids in the POU-specific domain of Oct-1 are critical for efficient transactivation of snRNA genes in vivo. The POU-specific domain of Oct-2A also activates these genes, but the N- and C-terminal domains are relatively inactive.

Indexed as

Gene Expression RegulationSaccharomyces cerevisiae ProteinsTranscription, GeneticBinding SitesDNADNA-Binding ProteinsHeLa CellsHost Cell Factor C1HumansOctamer Transcription Factor-1Octamer Transcription Factor-2RNA Polymerase IIRNA Polymerase IIIRNA, Small NuclearStructure-Activity RelationshipTranscriptional ActivationDNADNA-Binding ProteinsGAL4 protein, S cerevisiaeHCFC1 protein, humanHost Cell Factor C1Octamer Transcription Factor-1Octamer Transcription Factor-2POU2F1 protein, humanPOU2F2 protein, humanRNA Polymerase IIRNA Polymerase IIIRNA, Small NuclearSaccharomyces cerevisiae ProteinsTranscription Factors

Identifiers

PMID9153304
PMCPMC146712
OpenAlexW2070119588

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.