Evidence map›Paper›PMID 9151894›Full record

ArticleThe Journal of experimental medicine1997

The active site of ICP47, a herpes simplex virus-encoded inhibitor of the major histocompatibility complex (MHC)-encoded peptide transporter associated with antigen processing (TAP), maps to the NH2-terminal 35 residues.

B Galocha, A Hill, B C Barnett, A Dolan, A Raimondi, R F Cook, J Brunner, D J McGeoch, H L Ploegh

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
8.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 170 citations in OpenAlex.

  1. Review
  2. Article
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  5. Article
  6. Review
  7. Article
  8. Moving the Cellular Peptidome by Transporters.Frontiers in cell and developmental biology · 2018
    Review
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  12. Article
  13. Review
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  15. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

B GalochaCenter for Cancer Research, Department of Biology, Massachusetts Institute of Technology, Cambridge 02139, USA.
A Hill
B C Barnett
A Dolan
A Raimondi
R F Cook
J Brunner
D J McGeoch
H L Ploegh
Center for Cancer Research · USMassachusetts Institute of Technology · USMedical Research Council · GB

Funding

ASSEMBLY OF MHC CLASS I MOLECULES IN VITRO AND IN VIVOR01AI033456 · NIAID · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI PLOEGH, HIDDE L. · 1993 to 2012
$4.0M
NIAID NIH HHS R01AI33456
6 · The paper itself

Abstract

The herpes simplex virus (HSV) immediate early protein ICP47 inhibits the transporter associated with antigen processing (TAP)-dependent peptide translocation. As a consequence, empty major histocompatibility complex (MHC) class I molecules are retained in the endoplasmic reticulum and recognition of HSV-infected cells by cytotoxic T lymphocytes is abolished. We chemically synthesized full-length ICP47 (sICP47) and show that sICP47 inhibits TAP-dependent peptide translocation in human cells. Its biological activity is indistinguishable from that of recombinant ICP47 (rICP47). By using synthetic peptides, we mapped the core sequence of ICP47 minimally required for TAP inhibition to residues 2-35. This segment is located within the region of the molecule conserved between ICP47 from HSV-1 and HSV-2. Through alanine scanning substitution we identified three segments within this region that are critical for the ability to inhibit TAP function. The interaction of ICP47 with TAP is unlikely to mimic precisely that of the transported peptides, as deduced from differential labeling of the TAP1 and TAP2 subunits using sICP47 fragments with chemical cross-linkers.

Indexed as

Viral ProteinsAmino Acid SequenceAnimalsATP-Binding Cassette TransportersATP Binding Cassette Transporter, Subfamily B, Member 2Base SequenceBinding SitesBiological TransportHumansImmediate-Early ProteinsMacromolecular SubstancesMajor Histocompatibility ComplexMiceMolecular Sequence DataProtein BindingSimplexvirusATP-Binding Cassette TransportersATP Binding Cassette Transporter, Subfamily B, Member 2ICP47 protein, Herpes simplex virusImmediate-Early ProteinsMacromolecular SubstancesTAP1 protein, humanTap1 protein, mouseViral Proteins

Identifiers

PMID9151894
PMCPMC2196299
OpenAlexW2121113374

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.