Evidence map›Paper›PMID 9151848›Full record

ArticleJournal of virology1997

Efficient encapsidation of human immunodeficiency virus type 1 vectors and further characterization of cis elements required for encapsidation.

M S McBride, M D Schwartz, A T Panganiban

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 79 papers.

0numbers the graph read from it
0cells of the map it votes in
79citing papers in PubMed
3.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

79 citing papers in PubMed, 142 citations in OpenAlex.

  1. Article
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  15. Review
  16. Analysis of HIV-1 Gag-RNA Interactions in Cells and Virions by CLIP-seq.Methods in molecular biology (Clifton, N.J.) · 2016
    Article
  17. Article
  18. Article
  19. Article
  20. Picornavirus morphogenesis.Microbiology and molecular biology reviews : MMBR · 2014
    Review

19 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

M S McBrideMcArdle Laboratory for Cancer Research, University of Wisconsin Medical School, Madison 53706, USA.
M D Schwartz
A T Panganiban
University of Wisconsin–Madison · US

Funding

HIV-1 RNA ENCAPSIDATION, DIMER FORMATION, AND STRUCTURER01AI034733 · NIAID · UNIVERSITY OF WISCONSIN MADISON · PI PANGANIBAN, ANTONITO T · 1993 to 2002
$834k
NIAID NIH HHS R01 AI34733
6 · The paper itself

Abstract

To determine whether there is a cis-acting effect of translational expression of gag on RNA encapsidation, we compared the encapsidation of wild-type RNA with that of a mutant in which the translation of gag was ablated. This comparison indicated that there is not such a cis effect. To determine what is necessary and sufficient for encapsidation, we measured the relative encapsidation efficiencies of human immunodeficiency virus type 1 vector RNAs containing mutations in domains proximal to the canonical encapsidation signal or containing large deletions in the remainder of the genome. These data indicate that TAR and two additional regions are required for encapsidation and that the 5' end of the genome is sufficient for encapsidation. The Rev-responsive element is required mainly for efficient RNA transport from the nucleus to the cytoplasm. A foreign sequence was found to have a negative effect on encapsidation upon placement within the parental vector. Interestingly, this negative effect was compounded by multiple copies of the sequence.

Indexed as

Genetic VectorsBase SequenceCell LineGene Products, gagHIV-1HumansHydrogen BondingMacromolecular SubstancesMolecular Sequence DataMorphogenesisNucleic Acid ConformationRegulatory Sequences, Nucleic AcidRNA, ViralSequence DeletionStructure-Activity RelationshipGene Products, gagMacromolecular SubstancesRNA, Viral

Identifiers

PMID9151848
PMCPMC191676
OpenAlexW1604685779

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.