Evidence map›Paper›PMID 9121464›Full record

ArticleMolecular and cellular biology1997

A targeted mutation at the T-cell receptor alpha/delta locus impairs T-cell development and reveals the presence of the nearby antiapoptosis gene Dad1.

N A Hong, D Cado, J Mitchell, B D Ortiz, S N Hsieh, A Winoto

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In one paragraph

Article in Molecular and cellular biology, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 45 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Regulatory potential and control of Foxp3 expression in newborn CD4+ T cells.Proceedings of the National Academy of Sciences of the United States of America · 2004
    Article
  5. Article
  6. Article
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

N A HongDepartment of Molecular and Cell Biology, University of California at Berkeley, 94720-3200, USA.
D Cado
J Mitchell
B D Ortiz
S N Hsieh
A Winoto
University of California, Berkeley · US

Funding

MOLECULAR MECHANISMS OF ALPHA BETA T CELL DEVELOPMENTR01AI031558 · NIAID · UNIVERSITY OF CALIFORNIA BERKELEY · PI WINOTO, ASTAR · 1991 to 2003
$1.1M
NIAID NIH HHS R01 AI31558
6 · The paper itself

Abstract

Locus control regions are cis gene regulatory elements comprised of DNase I-hypersensitive sites. These regions usually do not stimulate transcription outside of a chromosomal context, and therefore their ability to regulate the expression of genes is thought to occur through the modification of chromatin accessibility. A locus control region is located downstream of the T-cell receptor (TCR) alpha/delta locus on mouse chromosome 14. This locus control region is known to drive T-cell-specific TCR alpha transcription in transgenic mice. In this report, we describe a targeted deletion of this locus control region and show that this mutation acts at a critical checkpoint in alphabeta T-cell development, between the TCR-intermediate and TCR-high stages. Our analysis further reveals that the antiapoptosis gene Dad1 is at the 3' end of the TCR alpha/delta locus and that Dad1 is required for embryogenesis. We show that mouse Dad1 has a broader expression pattern than the TCR genes, in terms of both tissue and temporal specificity. Finally, we report that the chromatin between TCR alpha and Dad1 is DNase I hypersensitive in a variety of cell types, thus correlating with Dad1 expression and raising the possibility that Dad1 regulatory sequences reside in this region.

Indexed as

Membrane ProteinsAllelesAnimalsApoptosisApoptosis Regulatory ProteinsDeoxyribonuclease IDNAEnhancer Elements, GeneticGene Expression Regulation, DevelopmentalGenes, RegulatorGene TargetingMiceMice, KnockoutMolecular Sequence DataMutationProteinsApoptosis Regulatory ProteinsDad1 protein, mouseDeoxyribonuclease IDNAMembrane ProteinsProteinsReceptors, Antigen, T-Cell, alpha-betaReceptors, Antigen, T-Cell, gamma-deltaRibonucleases

Identifiers

PMID9121464
PMCPMC232063
OpenAlexW2178752953

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.