Evidence map›Paper›PMID 9121424›Full record

ArticleMolecular and cellular biology1997

Interaction of a Swi3 homolog with Sth1 provides evidence for a Swi/Snf-related complex with an essential function in Saccharomyces cerevisiae.

I Treich, M Carlson

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Molecular and cellular biology, 1997. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 51 citations in OpenAlex.

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  14. Structure and function of the SWIRM domain, a conserved protein module found in chromatin regulatory complexes.Proceedings of the National Academy of Sciences of the United States of America · 2006
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 2 countries.

I TreichDepartment of Genetics and Development and Institute of Cancer Research, Columbia University College of Physicians and Surgeons, New York, New York 10032, USA.
M Carlson
Columbia College · CA

Funding

SNF/SWI COMPLEX AND TRANSCRIPTIONAL ACTIVATIONR01GM047259 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI CARLSON, MARIAN B · 1992 to 2004
$1.3M
NIGMS NIH HHS GM47259
6 · The paper itself

Abstract

The Saccharomyces cerevisiae Swi/Snf complex has a role in remodeling chromatin structure to facilitate transcriptional activation. The complex has 11 components, including Swi1/Adr6, Swi2/Snf2, Swi3, Snf5, Snf6, Snf11, Swp73/Snf12, and Tfg3. Mammalian homologs of these proteins have been shown to form multiple Swi/Snf-related complexes. Here we characterize an S. cerevisiae Swi3 homolog (Swh3) and present evidence that it associates in a complex with a Snf2 homolog, Sthl. We identified Swh3 as a protein that interacts with the N terminus of Snf2 in the two-hybrid system. Swh3 and Swi3 are functionally distinct, and overexpression of one does not compensate for loss of the other. Swh3 is essential for viability and does not activate transcription of reporters. The Snf2 sequence that interacts with Swh3 was mapped to a region conserved in Sth1. We show that Swh3 and Sth1 fusion proteins interact in the two-hybrid system and coimmunoprecipitate from yeast cell extracts. We also map interactions between Swh3 and Sth1 and examine the role of a leucine zipper motif in self-association of Swh3. These findings, together with previous analysis of Sth1, indicate that Swh3 and Sth1 are associated in a complex that is functionally distinct from the Swi/Snf complex and essential for viability.

Indexed as

Cell Cycle ProteinsSaccharomyces cerevisiae ProteinsAdenosine TriphosphatasesAmino Acid SequenceAnimalsBase SequenceConserved SequenceDNA-Binding ProteinsDNA, FungalDNA HelicasesFungal ProteinsGenes, FungalGenes, ReporterHumansLeucine ZippersMolecular Sequence DataAdenosine TriphosphatasesCell Cycle ProteinsDNA-Binding ProteinsDNA, FungalDNA HelicasesFungal ProteinsNuclear ProteinsOligodeoxyribonucleotidesRNA Polymerase IRNA Polymerase IIISaccharomyces cerevisiae ProteinsSMARCA2 protein, humanSMARCA4 protein, humanSNF2 protein, S cerevisiaeSTH1 protein, S cerevisiaeSWI3 protein, S cerevisiaeTrans-ActivatorsTranscription Factors

Identifiers

PMID9121424
PMCPMC232023
OpenAlexW2146281325

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.